Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3721 |
Symbol | |
ID | 8335074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4188149 |
End bp | 4188979 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644956861 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003114464 |
Protein GI | 256392900 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.456795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.243897 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCGG GCGCGCGCGC CGCGGTCACC GGCAAGTACG CGTCGTTGGT CGCCGCCTCC GTCGTGACGC TGTTGCCGCT GGTGGTCGTG TTCATGGCGG CGTTCAAGAC CGAGGCCGAG TCCCAGAACG GCGGACCGCT GAAGCCGCCG CACGACTGGT TCAACCTGCA CAACTTCCAG ATCGCCTTCA CCCAGGGGCA CATGCTCCGG GCGTTCGGGA ACACCGCGTT CATCCTGGTG TTCGCCGTCA GCGGCACGGT CCTGATCGGG TCGATGACGG CCTACGCGAT CGACCGCTAC CGCTTCCGGC TGCGGCGGCT GACCATCGGG CTGTTCCTGC TCGCCGCGCT GGTGCCCGGC GTCACCACGC AGGTCGCGAC GTTCCAGATC ATCAACTCCT TCGGCATCTT CGACACCCGC TGGGCGCCGA TCGCGCTCTA CACGGGCACC GACATCGTCT CGATCATGAT CTTCCTGCAG TTCATGCGGT CCATCCCGAT CTCGCTGGAC GAGGCCGCGC GTATCGACGG CGCCTCGCCG GTGCGGATCT ACTTCCAGGT GATCCTGCCG CTGCTGAAAC CGGCGATCGC CACGGTGGTG ATCGTCAAGG GCGTGGTCAT CTACAACGAC TTCTACACGC CGTTCCTGTA CATGCCCTCG CCCGACCTCG GGGTCATCTC CACCTCGCTG TACTACTTCA AGGGTCCCTA CGGCGCGCAC TGGGAGATCA TCTGCGCCGG GGCCGTTCTC GTGATCATTC CTACCCTGGT GGTGTTCTTG TTCTTGCAGC GCTTCATCTA CAACGGTTTC ACCCGCGGGG CGATGAAATG A
|
Protein sequence | MSAGARAAVT GKYASLVAAS VVTLLPLVVV FMAAFKTEAE SQNGGPLKPP HDWFNLHNFQ IAFTQGHMLR AFGNTAFILV FAVSGTVLIG SMTAYAIDRY RFRLRRLTIG LFLLAALVPG VTTQVATFQI INSFGIFDTR WAPIALYTGT DIVSIMIFLQ FMRSIPISLD EAARIDGASP VRIYFQVILP LLKPAIATVV IVKGVVIYND FYTPFLYMPS PDLGVISTSL YYFKGPYGAH WEIICAGAVL VIIPTLVVFL FLQRFIYNGF TRGAMK
|
| |