| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3701 |
|---|
| Symbol | |
|---|
| ID | 8335054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 4151927 |
|---|
| End bp | 4152913 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644956841 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003114444 |
|---|
| Protein GI | 256392880 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0770024 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTC AGCACAGCAG GACCCTGATC AACCACAACC GGGGCCGCCG GTCGGCGGCT
GCGGGTTCGG CGGCGGGCAA GCGCAAGCGC TCCGCCTTGG ACGACACCAC CACGCGGACG
CTGGTCTCCA GCGCCACGTT GAACCGCAGG CGGGGACGGA TCCTGTATTG GATCGTGGCC
ACGCTGGTGA TCGTCGGTTT CACGATGATC TTCCTCGGCC CGCTGTATTT CATGTTCACC
GACGGGCTGA AGTCGACGAA GGAGTCGGTG CAGAGTCCGC CGACGCTCTA CCCGCACGCC
GTCCACCCCG GAAACTACGT CGATGCCTGG AGCAAGACGG GGATCGCGCG GCTGTTGGGG
AACACGCTGT ACTACGCGTT CGGCGCGTTG GCGTTCCAGC TGGTCTTCGA CGTCGCCGCG
GCGTACGCGA TCTCCAAGCT GCGGCCGCGG TTCGGCAACG CGGTGTTCGG GCTGATGCTG
GCGACGCTGA TGATCCCGGC GCTGGTGCTG GTCGTACCGC AGTATCTGAC GGTCGCCGAC
GTGCCGGTGA TCCACCTGAA TCTGATCGGC TCGCCGGCGG CGATCTGGCT GCCCTCGGTC
GCCAACGGGT TCAGCATCTT CCTGCTCAAG CGGTTCTTCG ACTCGATTCC CGACGATCTG
ATGCACGCCG CCGCGATCGA CGGGGCGGGG CGGTTCAAGA CCCTGTGGTC GATCGTGCTG
CCGATGTCGC GGCCGATCCT GGCGGTGGTG TCGATCTTCG CGGTGACGTC GGTGTGGAAG
GACTTCCTGT GGCCGAAGCT GGTCGAGGGC GGGTTCAGCC CGACGCGGGA GACCCTGAAC
GTGGGGCTCA CGCAGGCGGC TAACACCTCG CCGCAGAACA TGGTGATCGC CGCTTCGGCC
ATCGCGGCGG TTCCGGCGAT CATCTTCTTC CTGGTGTTCC AGCGGAACAT CATGGCCGGT
CTGACGGTGG GGAGCTTGAA GGGGTAG
|
|---|
| Protein sequence | MSTQHSRTLI NHNRGRRSAA AGSAAGKRKR SALDDTTTRT LVSSATLNRR RGRILYWIVA
TLVIVGFTMI FLGPLYFMFT DGLKSTKESV QSPPTLYPHA VHPGNYVDAW SKTGIARLLG
NTLYYAFGAL AFQLVFDVAA AYAISKLRPR FGNAVFGLML ATLMIPALVL VVPQYLTVAD
VPVIHLNLIG SPAAIWLPSV ANGFSIFLLK RFFDSIPDDL MHAAAIDGAG RFKTLWSIVL
PMSRPILAVV SIFAVTSVWK DFLWPKLVEG GFSPTRETLN VGLTQAANTS PQNMVIAASA
IAAVPAIIFF LVFQRNIMAG LTVGSLKG
|
|---|
| |