Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3563 |
Symbol | |
ID | 8334916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3976820 |
End bp | 3977605 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644956706 |
Product | transcriptional regulator, SARP family |
Protein accession | YP_003114309 |
Protein GI | 256392745 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTCG ACATCCTGGG CCCGATGGAG GTCTGCGACG GCCGGACCCG GCTGACGCCC CGAGCCGCGA AGATCCGGAC CCTGCTGGCC GCCCTGCTGG TGTCGGCGAA CACCGCCGTC GGCACCGACA CCCTCATCAC CGAGATCTGG GGGACCAACC CGCCGCGCAC CGCGCTGCAC GCGCTGCGCG TCTACGCCTC CGAGATCCGC CAGATGATCG CCGCGATGAG CGACGATCCG GACCGGCCGG CGTTGGCCAC CTGGGCGTCG GGCTACTGCC TGGAACTGCG CTCGGACATG CTCGACATGC TCGAATTCGA CCGGCTCTGC GACGAGGGAC AGCGCGCCGC CACGAATCAG TGCTATGAGC TGGCGACGGA GAACTACCGG CGCGCGCTGG GATTGTGGCG CGGTCCGGCG TTGCTCGACG TGTCCTGCGG CGTCGTGCTG CACAGCGCCG CGCGCCGTCT TGAGGAGCGC CGGATCGCGG CGGTGAAGTC CCGCATCGAC ATCGACTTGC GCCTGCGCCG CCACGGCCAG GTCGTCCCCG AACTGACCGA GCTGGCCGCG CGGCATCCGT TCAACGAGAG CCTGCACGTG CGGCTGATGG TGGCCCTGCA CGGCTCCGGG CGCACCGGAG ACGCGCTGAC CGTCTACCGC GGACTGCGCG ACAGCCTGGT CGCCGAACTG GGAGTGGAGC CCAACGCGCA GTTGCAGCGC GTCCACCTGG CCATGCTCAC CGCCGACCAG CAGGTCTTGG ACCGGCAGGA TCTGTGGGCG CTGTGA
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Protein sequence | MRFDILGPME VCDGRTRLTP RAAKIRTLLA ALLVSANTAV GTDTLITEIW GTNPPRTALH ALRVYASEIR QMIAAMSDDP DRPALATWAS GYCLELRSDM LDMLEFDRLC DEGQRAATNQ CYELATENYR RALGLWRGPA LLDVSCGVVL HSAARRLEER RIAAVKSRID IDLRLRRHGQ VVPELTELAA RHPFNESLHV RLMVALHGSG RTGDALTVYR GLRDSLVAEL GVEPNAQLQR VHLAMLTADQ QVLDRQDLWA L
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