| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3549 |
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| Symbol | |
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| ID | 8334902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3962212 |
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| End bp | 3962997 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644956692 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003114295 |
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| Protein GI | 256392731 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.32556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCAT CCGACCAGCG GGTCGCCGTC GTCAGCGGCG CCACCAGCGG CATCGGGCTC
GCGGTGACGC GCCTGTTGGC CCAGCAGGGC CACCGGGTGT TCATCTGCGC CCGCAGCGCG
GAGTCCGTCG AGGTGACCGT CAAGGAGCTG CGCGAAGAAG GGCTGGAGGT GTCCGGCACG
GCCTGCGACG TCAAGAGCTC CGCGGACGTC GAGGCCTTCG TGCGCGCGGC GGTCGCCGCC
TACGGGCCGA TCGACGTGCT GGTGAACAAC GCCGGCCGCA GCGGCGGCGG CGTCACCGCC
GACATCACCG ACGAGCTCTG GTACGACGTC GTCGAGACCA ACCTGAACAG CGTGTTCCGC
ATGACCCGCG AGGTGCTCAC CGCCGGCGGG ATGCGCCAGA AGGAGCGCGG CCGGATCATC
AACATCGCCT CGACCGCGGG CAAGCAGGGC GTCGTGCTCG GCGCTCCGTA CTCGGCCTCC
AAGCACGGCG TCGTCGGCTT CACCAAGGCC CTGGGCAACG AGCTCGCGCC GACCGGGATC
ACGGTCAACG CGGTGTGCCC CGGCTATGTG GAGACCCCGA TGGCGCAGCG GGTGCGCGCC
GGCTACGCCG CGGCCCTGAA GACCTCCGAG GAAGCGGTCC ACGAGAAGTT CACGGCGAAG
ATCCCGCTGG GCCGCTACTC CACCCCCGAG GAGGTCGCCG GTCTGGTCGG CTACCTGGCG
ACCGACACCG CGGCCTCGAT CACCGCGCAG GCGCTCAACG TCTGCGGCGG CCTCGGCAAC
TTCTAG
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| Protein sequence | MSSSDQRVAV VSGATSGIGL AVTRLLAQQG HRVFICARSA ESVEVTVKEL REEGLEVSGT
ACDVKSSADV EAFVRAAVAA YGPIDVLVNN AGRSGGGVTA DITDELWYDV VETNLNSVFR
MTREVLTAGG MRQKERGRII NIASTAGKQG VVLGAPYSAS KHGVVGFTKA LGNELAPTGI
TVNAVCPGYV ETPMAQRVRA GYAAALKTSE EAVHEKFTAK IPLGRYSTPE EVAGLVGYLA
TDTAASITAQ ALNVCGGLGN F
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