Gene Caci_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3399 
Symbol 
ID8334752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3751306 
End bp3751761 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content67% 
IMG OID644956543 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_003114146 
Protein GI256392582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.067849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCAG AAGTACAGTC CGGACGGACA TCCCCCGTGG CTGAGGCCGC GGTGGAGACC 
GAGGCGGAGA CCGTGGTGAT CCAGGTACCG GCTGACGCTG ACTACTTGCC CATCATCCGC
TCGGCCAGCG CGCACGTCGC GACGAAGGTC GGGTGCACGC TGTCGGAGGT CGCCGATCTG
CGCCTGGCCG TCGACGAGGC CTGTGGCCTT CTCCTGCGGC ACACGATCAG AGACCGGCAG
TCCCTCACCG GCGCCGGAGA CCTGGTGTGC CGCTTCGTCC TCGACGAGGT GGCGCTGCGC
GTGGTGCTGA GTCGTCAGGC GCGTAACGCC GCGCCGCCGC AGAGCGATGA GTTCGGGTGG
ACGATCTTGT CCGCGCTGGT GGACGACATT TTGTGGCGGG TGGACGGTCC GACGGTGCAT
GTGGAGATTT TGAAGCGTCG TACGGGCGGG AAGTGA
 
Protein sequence
MDPEVQSGRT SPVAEAAVET EAETVVIQVP ADADYLPIIR SASAHVATKV GCTLSEVADL 
RLAVDEACGL LLRHTIRDRQ SLTGAGDLVC RFVLDEVALR VVLSRQARNA APPQSDEFGW
TILSALVDDI LWRVDGPTVH VEILKRRTGG K