Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3382 |
Symbol | |
ID | 8334735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3734723 |
End bp | 3735163 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644956526 |
Product | Roadblock/LC7 family protein |
Protein accession | YP_003114129 |
Protein GI | 256392565 |
COG category | [R] General function prediction only |
COG ID | [COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0893291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.993212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CACCGAGCCG CACCGGACTC AGCCGGCAGG CGCAGGACTT CTCGTGGACG GTCGACGCCT TCGTCCGCCA GACCGAAGGC GTCACCGACG CGATCGTGGT GTCCGCCGAC GGGCTGCCGA TCGCGGTCTC CGACACCCGC GGCCCGGACG CCGCCGACCG GCTCTCGGCC ATCGTCTCGG GCCTGGCGAG CCTGGCCGGC GCCGTCACCA CGACCGAGGA CCTGGGCCCG CTGAACAAGA TCATCATGGA CCTCGCCGAC GGCTACCTGC TGGTCGCCGC GATCGGCCAC CGGGCCCTGC TCGGCGTGCG CGCCATGAAG GGCTCGGACC TGGGGACCAT CGCCTTCGAG ATGACGGTGT ACGCCAACCA GGCCGGCGCG CGCCTGACGC CCTCGCTCGT GCACGAACTG CAACGGGCCA GGCCGCTGTG A
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Protein sequence | MSDTPSRTGL SRQAQDFSWT VDAFVRQTEG VTDAIVVSAD GLPIAVSDTR GPDAADRLSA IVSGLASLAG AVTTTEDLGP LNKIIMDLAD GYLLVAAIGH RALLGVRAMK GSDLGTIAFE MTVYANQAGA RLTPSLVHEL QRARPL
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