Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3376 |
Symbol | |
ID | 8334729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3726560 |
End bp | 3728197 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644956520 |
Product | Peptidase S53 propeptide |
Protein accession | YP_003114123 |
Protein GI | 256392559 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4934] Predicted protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.206514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.429578 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGTCA GCAACACTGC CTCCCGGCGT ATACGCCGGA CCCTCGGCGT CCTGGCCGCC CCGCTGCCCG TCCTCGTGCT CGCCCTCCCG GTGGCGCACG CCGCCACCCC GGCCCGGACC GCACTGGCCG GAACCGCCAC GCCGCATCTG GCCTCCGACA CCGTGCGGAC CGGAGCGGTG GCGGCGAACG CGCCGCTCAC CCTCGAGGTC AGCCTGACGC CGCGCAACCA GGCCGGGCTG GACGCGTTCC TGCGTCAGGT CTCCGACCCC GCCTCGCCGC AGTACAAGCA CTACCTGACC GTTGCGCAGT ACGCGGCCGC CTACGGCGCG ACCGACGCGC AGATCTCGCA GGTCACCAAG TACCTGCGCG GCCAGGGGTT GTCGGTCGGC GCGGTGACCG ACAACCACCA GACGATCGCC GTGCAGGGCA CCGCCGCGCA GGCGGAGAAG GCGTTCGGCG TGCAGTTGGG CACGTGGCGC AGCAGCGGTC GCGACGTGTT CGCGAACACC GCCGCGCCGA GCCTGCCCAC TGACATCGCC TCGATCGTCT CCGGCGTGGC GGGTTTGTCC AACGTCTCGC AGCGCACTGC CAGCTACCAC GTCGAGAGCC CCTCCGCCGT GCCGCACGCC GGTACCGTCC TGACGCCGAC CAAGGCTCGC GGCGGGTACA ACCTCACCGG TCCCCTGGCC TCCGGCGACA ACGGCTCTGG CAAGACCGTC GGCCTGGTGG AGTTCTCGGC ATACTCCGCT TCGGCGGTGT CGGCGTACAA CACCAAGTAC AGCCTGGGCG CCCCGGCGGC CACGGTGGTG AAGGTGGCCG GCGGCACGAC CGACACCTCC GGGTCGGTGG AGGACGAACT CGACATCGAG GTCGTCAACG CCCTGGCGCC GAAGGCGAAC GTGAAGGTGT ACGAGGCGCC CAACAGCGAC GCCGGCGAGG TCGCGCTCTA CGCGGCGCTG GTCAGCGCCG ACGTCCCGGT GATCTCCAGC AGCTGGGGCG AGCCGGAGAA CGAAGAGGCG AACCTGGCTT CCGACGACGC CGACTTCAAG GAAGCCGCGG CGCAGGGCCA GTCCGTCTTC GCCGCCTCCG GTGACAGCGG CGCGCGCGAC GACGGCTCGA GCCTGTCGGT CGACTACCCG GCCTCGGACC CGTACGTCAG CGGCGTCGGC GGCACGAACC TGACGGTGTC CTCGGCCAAC GCCTGGAGCA GCGAGACCGG CTGGTCCGGC AGCGGCGGCG GCCAGTCCGA CAAGTACACG ACCCCGAGCT ACCAGGCGCC GGTGAACACC AGCGGCCACC GCGAGGTCCC GGACGTCGCC GCCGCCGCCG GCAACAGCAG CCCGTGGTAC ATCGACGCCG ACGGCAGCTG GACCGACGTC TGGGGCACCA GCGCCGCCGC CCCGAACTGG GCCGCCTTCG TCGCCGACTA TGACACCGCG GCGACCAAGG CCGGCAAGGC GAGCTTCGGC TACGCCAACA GCTTCCTGTA CACCGTCGCC GGCAGCTCGA GCTACACCAC CGTCTTCCAC GACATCAAGA GCGGCAACAA CGGCGGCTAC AGCGCGGGCA CCGGCTACGA CGAGGTGACC GGCTGGGGTT CGTACAACGC GGCGCAGTTC ATCGCCACGA AGCTCTGA
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Protein sequence | MPVSNTASRR IRRTLGVLAA PLPVLVLALP VAHAATPART ALAGTATPHL ASDTVRTGAV AANAPLTLEV SLTPRNQAGL DAFLRQVSDP ASPQYKHYLT VAQYAAAYGA TDAQISQVTK YLRGQGLSVG AVTDNHQTIA VQGTAAQAEK AFGVQLGTWR SSGRDVFANT AAPSLPTDIA SIVSGVAGLS NVSQRTASYH VESPSAVPHA GTVLTPTKAR GGYNLTGPLA SGDNGSGKTV GLVEFSAYSA SAVSAYNTKY SLGAPAATVV KVAGGTTDTS GSVEDELDIE VVNALAPKAN VKVYEAPNSD AGEVALYAAL VSADVPVISS SWGEPENEEA NLASDDADFK EAAAQGQSVF AASGDSGARD DGSSLSVDYP ASDPYVSGVG GTNLTVSSAN AWSSETGWSG SGGGQSDKYT TPSYQAPVNT SGHREVPDVA AAAGNSSPWY IDADGSWTDV WGTSAAAPNW AAFVADYDTA ATKAGKASFG YANSFLYTVA GSSSYTTVFH DIKSGNNGGY SAGTGYDEVT GWGSYNAAQF IATKL
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