Gene Caci_3367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3367 
Symbol 
ID8334720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3719562 
End bp3720209 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content71% 
IMG OID644956512 
ProductNmrA family protein 
Protein accessionYP_003114115 
Protein GI256392551 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.670735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG CCGTCATTGG AGCATCGGGC CGTATCGGCT CGGCGGTCGC CCGCGAGGCA 
CTGGCCCGCG GGCACAGCAT CACCGCGGTC AGTCGGAACG CGGACCGTCT CACCGGCGTG
GACGGGGCGA CCCCGGCCGT GGCCGACCTC CGCGACCCGG CCTCGGTGGC GCAGGCGGTC
GCCGGCCACG ACGCCGTGGT CGCCTCCCTC AAGGGTGTCG ACGGCGACGA CGCCTCGCAC
CGCGTCATCC CCGACGGCGC GCAGGTCCTC CTCGACGTCC TGGCCGAGGC CGGGATCAAC
CGGCTGATCT TCTGCGGCGG CGGCGCCGGA CTGCTCCTCG GCGAGGACCG CATCATGGAC
CTCCCCATCT TCCCAGCCGA GTTCCAGGCC GAAGCCGTCG CCCAAGCCGA CGCCCTGGAC
CTGCTCCGCG CCGCCGACAC ACCGGTCGCG TGGTCCTACG CCTGCCCGTC GTCCATCCTC
CTCGACGAAG AACCGAAGAC CGGACAATAC CGCTCCGAGG CCACCGACTC GATCCTCATG
GACGACGAGG GCGATTGGCA GATCACCCTC CCGGATTACG CATCGGCCAT CGTCGACGCA
CTGGAATCCG GCGAATTCGC CCGACAGCGG TTCAGCGCCG TCAGCTGA
 
Protein sequence
MKIAVIGASG RIGSAVAREA LARGHSITAV SRNADRLTGV DGATPAVADL RDPASVAQAV 
AGHDAVVASL KGVDGDDASH RVIPDGAQVL LDVLAEAGIN RLIFCGGGAG LLLGEDRIMD
LPIFPAEFQA EAVAQADALD LLRAADTPVA WSYACPSSIL LDEEPKTGQY RSEATDSILM
DDEGDWQITL PDYASAIVDA LESGEFARQR FSAVS