| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3334 |
|---|
| Symbol | |
|---|
| ID | 8334687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3683442 |
|---|
| End bp | 3684599 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644956479 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_003114082 |
|---|
| Protein GI | 256392518 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATCGAC GTCTGACGGG CATCGCCGCC ACCGCGGTCG TCCTCGCCCT GAGCGCGACC
GCCTGCTCGT CGAGCAAGAG CTCTGCCAGC GGCAGCAGCG CGGCGGCCGG GGGCGCCGGG
AAGAGCGCCG CCAAGGCCAC CACCGCCGCC GATCTGGGCG GCATGGACGC TCTCGTCGCC
GCCGCGAAGA AGGAAGGCAC GCTGAACGTC ATAGCGCTGC CGAAGACCTG GGCCAACTAC
GGCGCCATCA TGGACGCCTT CACCGCCAAG TACGGCATCA AGATCACCGA CGCCAACCCG
GACGGCTCCA GCCAGGACGA GCTGAACGCG ATCAAGCAGC TGGCCGGCAA GAGCAGCGCC
CCGGACGTCG TGGACGTCGG CCAGGCCGCC GCCACCTCCG GTGCCGCCGC CGGCCAGTTC
GCGCCCTACC AGGTCGCCAC CTGGTCGCAG ATCGCCGACG CGCAGAAGGA CTCCCAGGGT
CTTTGGTACA ACGACTACGG AGGCTACATC GCCATCGGCT ATGACGCCGA CAAGGTGAAG
AACCCGCCGA CCACCCTGAA GTCCCTGGAC GACCCGCAGT ACAAGTCGCA GGTCGCCCTC
AACGGCGACC CGACGAAGGC CAACGCGGCG CTGTCCGGCG TCCTGGCCGC CTCGCTGGCC
AGCGGCGGCA GCCTGGACAA CGCCCAGCCC GGCATCGACT ACTTCGCCAA GCTGAAGTCC
GACGGCGTCT TCGTCCCGGT CGCCGCGACC CAGGCCACCA TCCAGTCCGG CACCACGCCG
ATCACCATCG ACTGGGACTA CCTGCAGGCC TCCGCCGCCT CCGACCTGAA GGCCAAGGGC
GTCACCTGGA AGGTCGTCGT GCCCTCCGAC GGTCTGTTCG GCGGCTTCTA CAGCCAGGCC
ATCAGCGCCA CCGCGCCGCA CCCGGCCGCC GCGCGCCTGT GGGAGGAGTT CCTGTACTCC
GCCGACGGCC AGAACCTGTG GCTCAAGGGC ATGGCCCGCC CGGCCGAGCT CCCGGCGCTG
CAGAAGGACG GCACCGCCGA CGCCACCGCG CTGGCCGCGC TGCCCGCCGT CACCGGTACC
CCGCAGTTCG CCACCCAGGA CCAGATGACC GCCGCGTCCA AGCTCGTGGT GGCCGGCTGG
GCGAAGGCGA CTGGCTGA
|
|---|
| Protein sequence | MNRRLTGIAA TAVVLALSAT ACSSSKSSAS GSSAAAGGAG KSAAKATTAA DLGGMDALVA
AAKKEGTLNV IALPKTWANY GAIMDAFTAK YGIKITDANP DGSSQDELNA IKQLAGKSSA
PDVVDVGQAA ATSGAAAGQF APYQVATWSQ IADAQKDSQG LWYNDYGGYI AIGYDADKVK
NPPTTLKSLD DPQYKSQVAL NGDPTKANAA LSGVLAASLA SGGSLDNAQP GIDYFAKLKS
DGVFVPVAAT QATIQSGTTP ITIDWDYLQA SAASDLKAKG VTWKVVVPSD GLFGGFYSQA
ISATAPHPAA ARLWEEFLYS ADGQNLWLKG MARPAELPAL QKDGTADATA LAALPAVTGT
PQFATQDQMT AASKLVVAGW AKATG
|
|---|
| |