Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3189 |
Symbol | |
ID | 8334542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3518277 |
End bp | 3519464 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644956335 |
Product | aminotransferase class V |
Protein accession | YP_003113938 |
Protein GI | 256392374 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0446286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAAGG TCCTGACGGA CACCCCGGGG GCGGCGAAGC GGGTCTTCCT GAACAGCGCC GGCAGCTCGC TCATGCCCAC GCCGGTCCTG GAGGAGGTGC TCGGCCACCT GCGCCGCGAG ACCGAGATCG GCGGCTACGA GGCCGCCGAC GAACGCGAGG CCGACCTCGA GGCCGGCTAC GGCGTGTTCG CCGAACTGCT CGGCTGCCGC CCCGACCAGG TCGCCTTCAC CGACAGCGCG ACCCGCTCCT GGCTGGCCGC CCTGGACGCG GTCCCGCTGG GCGCCGGCGA CCGCGTCCTG GTCGGCGAGG TCGAATACGG CGGCAACGCC ATCGCGCTGC TGATGCGCGC CCAGGCCGTC GGCGCCTCGG TCGAGGTCGT GCCCAGCGAT GCCGACGGCA CGTTCGCCGC CGACGCCCTG GCCGCGATGC TCGACGAGCG CGTGAAGCTG GTCTCGGTCG TGCAGGTCCC GACCAACGGC GGCGTGGTCG CCGACGTGCG CCGCATCAGC GACGCCGTGC ACGCCGCCAC CGGCGCCCTG GTCCTGCTCG ACGCCTGCCA GGCGGTCGGC CAGCTGGCCG TGGACGCCGA GGCCCTGGAC GCCGACATCC TCACCGGCAC CGGCCGCAAG TGGCTGCGCG CCCCCCGAGG CACCGGCTTC CTGGTCGTGC GCGACCGCGC GAAGGCGATC CTGCGGCCCG CACTCGCCGA CCTGCAAGGC GGCACCTGGA CCGGCGCCGA CCGCTACCTC CTGCGCGACG ACGCGCGGGT GTACGAGCTC TGGGAGTGCG ACAACGCCGG CCGCCTCGGC CTGACCGCCG CCGCACGCTA CCTGCTGGAC CTCGGCCTCG ACGCGGTGGA GCAGGAAGTC ACCCGCCGCG CCGAGTACCT GCGCACGGCC CTGGCCGCGA TCCCCGGCGT CACAGTCCGC GACCTGGGCG CGCGCAAAAG CGGCCTGGTC ACCTTCGACG TCGCGGGGCT CGCCGCCGGC GAGGTCCAGG CGGCGCTCGC GCGCCAGGAC ATCGCGGTCA GCATCACCCG CCGGTCCTCG ACCTTCCACG ACATGGCGCG CCGCGGACTG ACCGAGCTGG TGCGCGCCTC GCCGCACTAC TTCGTGACCG AGCCGCAGCT CGACGCGGCC GCCGAGGCGG TCGCCGAGCT GGCCCGGGCG GCGGGCGCGC GGTCCTGA
|
Protein sequence | MTKVLTDTPG AAKRVFLNSA GSSLMPTPVL EEVLGHLRRE TEIGGYEAAD EREADLEAGY GVFAELLGCR PDQVAFTDSA TRSWLAALDA VPLGAGDRVL VGEVEYGGNA IALLMRAQAV GASVEVVPSD ADGTFAADAL AAMLDERVKL VSVVQVPTNG GVVADVRRIS DAVHAATGAL VLLDACQAVG QLAVDAEALD ADILTGTGRK WLRAPRGTGF LVVRDRAKAI LRPALADLQG GTWTGADRYL LRDDARVYEL WECDNAGRLG LTAAARYLLD LGLDAVEQEV TRRAEYLRTA LAAIPGVTVR DLGARKSGLV TFDVAGLAAG EVQAALARQD IAVSITRRSS TFHDMARRGL TELVRASPHY FVTEPQLDAA AEAVAELARA AGARS
|
| |