| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3139 |
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| Symbol | |
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| ID | 8334492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3446372 |
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| End bp | 3447886 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644956286 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003113889 |
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| Protein GI | 256392325 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGG CCCAACGCTG GGTCCTGACC CTCACTTCGC TGGCCGCCTT CATGATCGCC
CTGGACGGCA CCATCGTCAC CACGGCGCTG ACCACTATCC GCAAGTCCCT GAACACCTCC
GTCGAGGCGC TGGAGTGGAC CGTCAGCGCC TACATCCTCA CCTTCGCCGT GCTGATGCTC
ACCGGCTCGG CCCTCGGCGA CCGCTTCGGC CGCCGCAAGG TCTTCGTCGG CGGTCTGACC
CTGTTCACCG CCGCCTCGGC CGCCTGCGGC CTGTCCTCGA CCGTCGCCGA GCTGATCGCG
GCGCGCGCCG TCCAGGGCGT CGGCGCCGCG GTCATCATGC CGCTGGCCAT AGCGCAGCTC
GGCGCCGCGT TCCCGCCGCA GGAGCGCGGG CGCGCGATGG GCGTCTCGGC CGGCATCATC
GGCCTGGCCA CCGCCGGCGG CCCGTTCGTC GGCGGCGTGG TGGCGCAAGG ACTCGCCTGG
CAGTGGCTGT TCTGGGTCAA CGTCCCGGTC GGGGTGCTGG TCATCGCCGG CGTCCTGCTG
AAGATGTCCG AGACGCACCA GCATCCGGGA CAGCCTCAAG GCCCGCGCGC ACGTCTGGAC
CTGGTCGGCG TCCTGCTCAC CACCGGCGGC GTCCTGGGTC TGGTGTGGGC GCTGGTCCGG
GGGAACGACG CGGGCTGGCT CTCGCCGGAG ACGCTCGGCG CGGCGGCGAT CGGCGTCGTG
CTGACGGTCG CGTTCGTGTT CTGGGAACTG CGCGTCCCGG CGCCGATGGT CCCGATGCAC
TTCTTCACGC ACCGAGCCTT CTCAGCGGGC AACGTCGCGA GCTTCACCAT GACCGGCGCG
ATGTACGCCC AGCTGTACTT CCTGGCGCAG TACTACCAGA CCGTCCTGCA CTACGGCCCG
TTCGGCGCGG GGGTCCGAAT GATGCCGTTC TCAGCGACGC TCCTGGTCTT CGGCCCACTT
TCCGGACGAC TGGCGGACCG CCTGGGGGAG CGCCGCCTGG TCTCCACCGG TCTGGCGGTC
CAGTCGCTCG GCCTGGTCGC CATCGCCCTA CTCGCCGACC ACCACGCCGC CTACCTGGCG
ATGGTCCCCG CGCTGGTCCT CAGCGGCGCC GGGGTGTCCA CCGGCATCCC GCCGACGCAG
AAGGCCGTGG TCAGCGCGGT GCAGCCGCAC CAGATCGGCC AGGCCTCAGG CGTGTTCAGC
ATGCTGCGCC AGTTCGGCGC ACTGTTCGGG ACCGCCGTAT CGGTCGCGGT CTTCGCCGCC
TCCGGCAGCT ACGCGAGCGT GCAGCGCTTC ACCGACGGAT TCACCGCCGC GATCTCGGTC
GGCGCGGCGC TCGCGGCGGT CGGAGCCGTC GCCGCGCTGC TGCTGCCGCG GCTGCGCGGT
ACGGGTCCTG CGGGTCCTGC TGGTCCTGCT GGTCCTGCGG GCTCTGCGGG TTCTGCGGGT
TCTGCGACAA CAGGGTCCTC GGGGACCTCG GGATCCACCG AGCCGTCAGG GCGCGAGCCG
ATCGCAGCCC GCTGA
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| Protein sequence | MTAAQRWVLT LTSLAAFMIA LDGTIVTTAL TTIRKSLNTS VEALEWTVSA YILTFAVLML
TGSALGDRFG RRKVFVGGLT LFTAASAACG LSSTVAELIA ARAVQGVGAA VIMPLAIAQL
GAAFPPQERG RAMGVSAGII GLATAGGPFV GGVVAQGLAW QWLFWVNVPV GVLVIAGVLL
KMSETHQHPG QPQGPRARLD LVGVLLTTGG VLGLVWALVR GNDAGWLSPE TLGAAAIGVV
LTVAFVFWEL RVPAPMVPMH FFTHRAFSAG NVASFTMTGA MYAQLYFLAQ YYQTVLHYGP
FGAGVRMMPF SATLLVFGPL SGRLADRLGE RRLVSTGLAV QSLGLVAIAL LADHHAAYLA
MVPALVLSGA GVSTGIPPTQ KAVVSAVQPH QIGQASGVFS MLRQFGALFG TAVSVAVFAA
SGSYASVQRF TDGFTAAISV GAALAAVGAV AALLLPRLRG TGPAGPAGPA GPAGSAGSAG
SATTGSSGTS GSTEPSGREP IAAR
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