| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3137 |
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| Symbol | |
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| ID | 8334490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3443858 |
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| End bp | 3445108 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644956284 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003113887 |
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| Protein GI | 256392323 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAAAC CGAGCGAGGC CGTCCACGAC GGCGTCCACG CCGCTGTCAC CCGCGCCCAC
CGCGAGGAGT GGGCCCGGGT GGTCGCCACC CTGACCCGGC GCTTCGGCGA CCTCGACGTC
GCCGAGGAGG CGGCCGCCGA GGCGTTCGCG GCGGCCGTCG AGCACTGGCG CGCCGAGGGC
GTGCCGCCCA ACCCCGGCGG CTGGCTGACC ACCACCGCGC AGCGCAAGGC CATCGACCGG
GTACGCCGCG AGGCCAAGCG CGGCGACAAG CAGAAGGAGG CTCAGGTGTT CTTCCACGAC
GACCCGCCCG AGCCGGTCGG CGCCATCGAG GACGAACGGC TCCGGCTGGT CTTCACCTGC
TGCCACCCGG CACTGGCGAT GGAGAGCCGC GTCGCCCTGA CCCTGCGCAT GCTCGGCGGC
CTGACCGTCG CCGAGATCGC CCGCGCCTTC CTGGTGCAGG AGACCGCGAT GGGGCAGCGC
ATCACCCGCG CGAAGGGCAA GATCAAGGCC GCGCGCATCC CCTACCGCGT CCGGTCGGCC
GAAGACCTGC CGGCCCGCGT CACCGGCGTG CTCTCGGTCC TGTTCCTGGT CTTCAACGAG
GGCTACCTGG CCACCGGCGC CGACACCGAC CCCGTCCGCC AGGACCTCAC CGCCGAGGCG
ATCCGCTTGA CCCGCCTGAT CCGCACCCTG CTGCCCCGCG ACGGCGAGAC CGCCGGACTG
CTGGCGCTGA TGCTCCTCAC CGAGGCCCGC CGCCCCGCCA GAGTCTCGGC GACCGGCGAA
CTGGTCTCCC TCGACGAGCA GGACCGCGGA GCCTGGGACA GGGCCCTGAT CGCCGAGGGG
CACCAGCTGG TCCGCGAACG CCTGGCCAGC GGCATCGCGC CGGGCCGCTA CCAGATCCTC
GCGGCGATCA ACGCCGTCCA CACCTCGGCC CGCGACGCGC GCGACACGGA CTGGTCGCAG
GTCGTCGCCC TCTACGACCA GCTGGTCCGG ATCGACCCCT CACCGATCGT CGCCCTGAAC
CGCGCCATCG CCGTCGCCGA ACTCGACGGC CCGGAGGTTG CCCTGGCGAC GATCGACCGC
CTCGGCGACC GGCTCGACGG CTACCACGCC TACCACGCGG CGCGCGCCGA CCTGCTGCGG
CGCACTGGCC GCAGCACGGA GTCGCGGACG GCGTACGACA GGGCGATCGA GCTGGCGGGG
AACTCCGGGG AGACGGCCTA TCTGACGCGG CGGCGGGATC AGTTGGGGTA G
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| Protein sequence | MGKPSEAVHD GVHAAVTRAH REEWARVVAT LTRRFGDLDV AEEAAAEAFA AAVEHWRAEG
VPPNPGGWLT TTAQRKAIDR VRREAKRGDK QKEAQVFFHD DPPEPVGAIE DERLRLVFTC
CHPALAMESR VALTLRMLGG LTVAEIARAF LVQETAMGQR ITRAKGKIKA ARIPYRVRSA
EDLPARVTGV LSVLFLVFNE GYLATGADTD PVRQDLTAEA IRLTRLIRTL LPRDGETAGL
LALMLLTEAR RPARVSATGE LVSLDEQDRG AWDRALIAEG HQLVRERLAS GIAPGRYQIL
AAINAVHTSA RDARDTDWSQ VVALYDQLVR IDPSPIVALN RAIAVAELDG PEVALATIDR
LGDRLDGYHA YHAARADLLR RTGRSTESRT AYDRAIELAG NSGETAYLTR RRDQLG
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