Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3123 |
Symbol | |
ID | 8334476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3433281 |
End bp | 3434159 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644956270 |
Product | protein of unknown function DUF881 |
Protein accession | YP_003113873 |
Protein GI | 256392309 |
COG category | [S] Function unknown |
COG ID | [COG3879] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCTCCA TGCCCACGCC GCCCGACGTC CGGAGCACCC CGCGCCGTGA CGCCTCGATG TCGCTGCTGA CCAGCCTGCT CAACGACACG CTGGACCCCG GGTACGCCGA GACCGCGGCG CGGCGCAAGG CGGTCGGCGG CGAGGAGGCC GTCGCCAGCC ACTGGACGCG GCGTCCCTCG CCCACGGTGC TGTTGGGCGT CGCGGCGGTC GCGCTGGTGC TCGTCATCGC CGCGATCCAG ACCCACCGGC AGGCGCCGGC GGTCGAGCGC GAGCGGAACC AGCTGATCTC CCGGGTGCAG GACGGCGAGC GGAAGAACTC TGCCGACGAG TCGATGATCT CCACGCTCCG CGGGCAGTTG CAGGCGGCGC AGGCCGAGGC GCTGGGACCG GAGCAGGGCA AGGCGTTCAC CGCGCTGTCG GTGGCGACCG GCGCCGCGCC GGTGACCGGA CCGGGCCTGG AGGTCGTGCT CAACGACGCC GCCGGCGCCG ACAGCGCGGC CAGCAGCGAC CCGCGCCAGA CCAGCACCAA CCAGAGCCGG GTGCTCGACC TGGACTTGCA GAACGCGACG AACGGGCTGT GGGCGGCCGG CGCGGAGGCG ATCTCGATCA ACGGCCAGCG GCTCACCGCG CTGTCCGCGA TCCGCACCGC CGGCTCGGCG ATCATGGTGG ACTTCCGGCC GCTGTCGCCG CCGTACACGC TGCAGGCGAT CGGCGACCCG AAGTCGATGG CGGCGAAGTT CGCCGACGGC GCGGACGGCC GGTACCTGTT CGAGCTGAAG TCGCAGTACG GGATCGGATT CACCACGAGC ACGAAGAACA AGCTCAGCCT GCCGGCGGCC ACGCAGCTGT CGCTGACCGA CGCGGTGCCG GCGCCGTGA
|
Protein sequence | MASMPTPPDV RSTPRRDASM SLLTSLLNDT LDPGYAETAA RRKAVGGEEA VASHWTRRPS PTVLLGVAAV ALVLVIAAIQ THRQAPAVER ERNQLISRVQ DGERKNSADE SMISTLRGQL QAAQAEALGP EQGKAFTALS VATGAAPVTG PGLEVVLNDA AGADSAASSD PRQTSTNQSR VLDLDLQNAT NGLWAAGAEA ISINGQRLTA LSAIRTAGSA IMVDFRPLSP PYTLQAIGDP KSMAAKFADG ADGRYLFELK SQYGIGFTTS TKNKLSLPAA TQLSLTDAVP AP
|
| |