Gene Caci_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3123 
Symbol 
ID8334476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3433281 
End bp3434159 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content73% 
IMG OID644956270 
Productprotein of unknown function DUF881 
Protein accessionYP_003113873 
Protein GI256392309 
COG category[S] Function unknown 
COG ID[COG3879] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCA TGCCCACGCC GCCCGACGTC CGGAGCACCC CGCGCCGTGA CGCCTCGATG 
TCGCTGCTGA CCAGCCTGCT CAACGACACG CTGGACCCCG GGTACGCCGA GACCGCGGCG
CGGCGCAAGG CGGTCGGCGG CGAGGAGGCC GTCGCCAGCC ACTGGACGCG GCGTCCCTCG
CCCACGGTGC TGTTGGGCGT CGCGGCGGTC GCGCTGGTGC TCGTCATCGC CGCGATCCAG
ACCCACCGGC AGGCGCCGGC GGTCGAGCGC GAGCGGAACC AGCTGATCTC CCGGGTGCAG
GACGGCGAGC GGAAGAACTC TGCCGACGAG TCGATGATCT CCACGCTCCG CGGGCAGTTG
CAGGCGGCGC AGGCCGAGGC GCTGGGACCG GAGCAGGGCA AGGCGTTCAC CGCGCTGTCG
GTGGCGACCG GCGCCGCGCC GGTGACCGGA CCGGGCCTGG AGGTCGTGCT CAACGACGCC
GCCGGCGCCG ACAGCGCGGC CAGCAGCGAC CCGCGCCAGA CCAGCACCAA CCAGAGCCGG
GTGCTCGACC TGGACTTGCA GAACGCGACG AACGGGCTGT GGGCGGCCGG CGCGGAGGCG
ATCTCGATCA ACGGCCAGCG GCTCACCGCG CTGTCCGCGA TCCGCACCGC CGGCTCGGCG
ATCATGGTGG ACTTCCGGCC GCTGTCGCCG CCGTACACGC TGCAGGCGAT CGGCGACCCG
AAGTCGATGG CGGCGAAGTT CGCCGACGGC GCGGACGGCC GGTACCTGTT CGAGCTGAAG
TCGCAGTACG GGATCGGATT CACCACGAGC ACGAAGAACA AGCTCAGCCT GCCGGCGGCC
ACGCAGCTGT CGCTGACCGA CGCGGTGCCG GCGCCGTGA
 
Protein sequence
MASMPTPPDV RSTPRRDASM SLLTSLLNDT LDPGYAETAA RRKAVGGEEA VASHWTRRPS 
PTVLLGVAAV ALVLVIAAIQ THRQAPAVER ERNQLISRVQ DGERKNSADE SMISTLRGQL
QAAQAEALGP EQGKAFTALS VATGAAPVTG PGLEVVLNDA AGADSAASSD PRQTSTNQSR
VLDLDLQNAT NGLWAAGAEA ISINGQRLTA LSAIRTAGSA IMVDFRPLSP PYTLQAIGDP
KSMAAKFADG ADGRYLFELK SQYGIGFTTS TKNKLSLPAA TQLSLTDAVP AP