Gene Caci_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3025 
Symbol 
ID8334376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3342676 
End bp3343854 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content64% 
IMG OID644956171 
Producthypothetical protein 
Protein accessionYP_003113775 
Protein GI256392211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.971667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0981604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA CCTTCGGAGC TGTGTACCTG CGGATCTGGC GCGACCAGGA CTTCCGTGCA 
CTCAGTCACA CCGAGCAGTA CCTGTACTGG ACGTTGATCT TTCAGCCCAA GCTCAACCGC
GCCGGCCTGC TGGAGTACTC CCCGCGTCGA TGGGCCGACG TCAACAACGA CCTCTCGGTG
CACGATGTCG AGGTCACCAT CAAGAGCCTG GAGCAGCGCC ACTACGTCGT CCTGGACGAG
TCCACCAACG AGCTGCTGAT CCGCACCTAC GTCCGCAACG ACGAGGCGTG GAAGCAGCCG
AAAGTCATGG CCTCTGTCGT TTCGGCTGCG AATGAAATCG AGTCGCCGCG GCTCCGGAGG
GCGCTGTACG ACGAGTTGGA CCGCATCCCG GTTCGGGAAT TGTCCGACTC CCCCGGGCTT
AATGGCGGAC CTTCAGTCCG GTCGAAGATT GAGAAGTCGA TTGCTCAATT GAGGGTCATC
CTCGGCGGCA ACGGACCGGA CGGATCGGAT GGGTTCCGAC CCCCAGCCGA TACCCCACCG
GAAGGGTATC GGACGGCTAC CGATACCCCT GAGGTACCCG AAGGCAGGGC TACCGATACC
CGTGTCAATA CCGCAGCGGT AGCCACTAGT CATAGACCTG CTCCAGAACC TGCTCCAGAA
CTAGAACCAG AACCGTTCGG CGCGCCAGCC GACGAGTCTG CTTCCGTCGC GCTGTTCGAA
ACCGCACCTG CGGTGCGCGA CGACGATCCC GGCGAAGCGG CGCCCAAAGG ACCCGGCGCC
TCCACCCTCG TTGCCGAATG GCTTGAATAC CGCGGCAAGC AGCGGCCCTC GTCGCGAATC
ATCGGGCGCG TCGGAAAAGA ACTGAAAACC CTTCTCGCCG ACGGAATCCC TTACGAGATC
GTGCGCGAAG GATTCATGGC CTGGGAGAAC AAGGGACTCG ACCCGGCAAA GATCGACTCC
TGCGTCAACG AGGTCCAGTC CATCCTCCGG CGCCAAGCCG CTAGCTCCGG TGCGCAGCTT
GCGCTGCCGT CAGGTGCCAC GGACGAGGCC GACAGCGACA ACGTCATCCA GTTCCGCCCC
AACATCCCAG CCCCGCGCCC ATCCACCACT GACCGCGCCG TTGCCTCCGG CGACACCGCC
CTTGCCGAGT TCCGGCGCAT GACGGGACGG ACCGCATGA
 
Protein sequence
MARTFGAVYL RIWRDQDFRA LSHTEQYLYW TLIFQPKLNR AGLLEYSPRR WADVNNDLSV 
HDVEVTIKSL EQRHYVVLDE STNELLIRTY VRNDEAWKQP KVMASVVSAA NEIESPRLRR
ALYDELDRIP VRELSDSPGL NGGPSVRSKI EKSIAQLRVI LGGNGPDGSD GFRPPADTPP
EGYRTATDTP EVPEGRATDT RVNTAAVATS HRPAPEPAPE LEPEPFGAPA DESASVALFE
TAPAVRDDDP GEAAPKGPGA STLVAEWLEY RGKQRPSSRI IGRVGKELKT LLADGIPYEI
VREGFMAWEN KGLDPAKIDS CVNEVQSILR RQAASSGAQL ALPSGATDEA DSDNVIQFRP
NIPAPRPSTT DRAVASGDTA LAEFRRMTGR TA