Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3014 |
Symbol | |
ID | 8334365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3338039 |
End bp | 3338452 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956160 |
Product | transcription factor WhiB |
Protein accession | YP_003113764 |
Protein GI | 256392200 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.371665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0294243 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCCGC TCCTGCGCAC CGACGGACCC ATCCACGGGC GAGTCCCGCG GACCGACACC ACAATCCAGT CCAGCACCAC CCGCTACCAG GCACCCGCCG AGCCGGAGTC GGAAGACAAC TGGCGCCTGC GCGGCGTCTG CGCCAACTCC GGCGACATGG ATCGCTGGTT TCCCATGGGC AACACCGGCC CGTGGCTACG GCAGATCGAA GAGGCGAAGA AGGCCTGCCT CACCTGCCCG GTTCTGGAGA AGTGCGCCGA GCTGCTGGCG CACATGGAAC GCGAGCTGGG CGTCAACAGC GTGTCCGGGA TCTGGGCCGG CACCGCGGAG GACGACCGGA TGAGCGAGAA GCGCAAGCAG CAGCGCGCAG CGGCAAAGGT CCGCTACGAC GAGAAGCGGA AGGCTGCGGC GTGA
|
Protein sequence | MTPLLRTDGP IHGRVPRTDT TIQSSTTRYQ APAEPESEDN WRLRGVCANS GDMDRWFPMG NTGPWLRQIE EAKKACLTCP VLEKCAELLA HMERELGVNS VSGIWAGTAE DDRMSEKRKQ QRAAAKVRYD EKRKAAA
|
| |