Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2944 |
Symbol | |
ID | 8334294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3307205 |
End bp | 3307726 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644956089 |
Product | hypothetical protein |
Protein accession | YP_003113694 |
Protein GI | 256392130 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0037931 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000414194 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTCAGA CCACCGAAGC CGCGGCCCTC TGCGCCAACC CCGAGTGCAC GCGCGAGAAG AAGCACCCCG GACTGTGCTC CGACGACATC GCGGCGCGCA CCGGCCTCAC CGTCAAACAG GTCCAGACGG TTCTCGACTT CGAGGCGAGG ATGGCTGTCG AGAACCCGCA GAACATCCAG GCCGGCGACC AGGTGAAGTT GACCATCAGC GAGTGCCCGG ACCTCGTTAC CGGCACCGTC GTCCGGGTCT ACCTGGACGC AATCGGCAGC CTCGTCGCCG ACATCCAGAT CGGCGACGAT GTCCGGCCGC AGAACGTCAA GTTCCTCACC CGCGTCGATC CGAGCTACGC GCAGACCGTA ACGCGGCTAG CCCGCGAGTA CCACGTCGCG AAGGCTACCG GCCAAATGTC CGACCGGATG ATCGCCACGA TGCTCGCGAA GTTGCGCACC GCCGCCGGGT GCGCGGGCGT CTCTGCGGAG GACGCGTACA ACGACCTGTG GGACGAGGTC GACACGGCCT GA
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Protein sequence | MPQTTEAAAL CANPECTREK KHPGLCSDDI AARTGLTVKQ VQTVLDFEAR MAVENPQNIQ AGDQVKLTIS ECPDLVTGTV VRVYLDAIGS LVADIQIGDD VRPQNVKFLT RVDPSYAQTV TRLAREYHVA KATGQMSDRM IATMLAKLRT AAGCAGVSAE DAYNDLWDEV DTA
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