Gene Caci_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2908 
Symbol 
ID8334258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3291659 
End bp3292033 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content66% 
IMG OID644956053 
Producthypothetical protein 
Protein accessionYP_003113658 
Protein GI256392094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000173097 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0315701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGC CGACCATCAC CCCCGTTTCG GACGAAAGGC AAGGCCTGAT GACCGACAGC 
GCAACAACCT GCCCCGAGTG CGGCACCCCG GCCCCCGACT GGAATGCCGA GGAGCGCGAG
TGCGACACCT GCGTGGCGAT CGCCGATCTC GCCAATGCCC GCGACCAGCT TGCTGAGGCC
ATCGAGTACG AGGAATGGGG TGCGGCCCGC AACGAGCTGG AGTGGCTCGG TCAGGTCATC
GGCAGGCTCC ACAAGGCGCT GGACGTGATC AGCGATTCTG ATGCGCACAA CCGGATCGTG
GACCTGCTGA ACCAGGCCAG CGTGCAGTAC AACGCGGCTG CGGATCAGTC GAACGCGGCG
GGAGGGTGGC GGTGA
 
Protein sequence
MPEPTITPVS DERQGLMTDS ATTCPECGTP APDWNAEERE CDTCVAIADL ANARDQLAEA 
IEYEEWGAAR NELEWLGQVI GRLHKALDVI SDSDAHNRIV DLLNQASVQY NAAADQSNAA
GGWR