Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2835 |
Symbol | |
ID | 8334184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3239350 |
End bp | 3241566 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644955979 |
Product | hypothetical protein |
Protein accession | YP_003113585 |
Protein GI | 256392021 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000503962 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0000867328 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCCGG CCGGGCAGCC GTTCGACACC GGCCCCGGCG GTCCGATCGG CATCCGCGTC GAGATCATGT TGGACCCGTC CGGAAACGAC TGGACCGACA TCACCCCATA CGTGTACTAC CGGGACCGCA TCAGAATTAC CAGGGGTCGC CCCGATGAGA CCTCTGGGGC CCAGCCTCAG ACCTGCACGC TGACGCTGAA CAATCGCGAC GGCCGGTTCA CCCCGAAGAA TCCCCTCGGC CCCTACTACG GGGTATTGGG GCGCAACACC GCGATCCGCG TCTCACGTCT GGTCAACGGG TCCAACGATC CGTGGTACCG GTTTTACGGC GAGGTTCCGT CGTGGCCCAC CACCTGGGAT ATTTCCGGGT CCGACGTGTA CACGCAGATC CAGGCGTCCG GAATCCTGCG ACGGCTGAAC CAGGGCAATG TCCCCGAGGG CTCGGCGATG CGACGGGCGT ACACTCTCAG CGCTGGCGTA TCGTCCGCGG TAGCGTACTG GCCTTGCGAG GACGGCCAGA CCGCAACATC GTTGGCGTCG GCGTTGGCGT GGCCGACGGG CACAGCCCTG ACCTTGTCGG GGCAGGCTCC GCCCAGCCTT TCCAACTTCA CCGGGTTTCT GTGCTCAGAC TCACTGCCGC TGCTGTCGGC CAGCATCTGG AATGGCGCGA TCCCGGCAGA TCCGTTCAAT GGCACCGACA ACGTTCTGCG CTTCCTGCTT GCCGTGCCTG CGACCGGCGC CTTTGACACT GCCGTCATTG CACGCCTGTT CACCTCCGGC CGGGTGGCCC GACTGGACCT GCAATACGGT TCGGCAAGCA ACGGGTCGCT GCAAATCTCC GGATACAGCG TTTCCGGAAC CCTGTTGTTC TCCTCCGGCT ACGTCGGTTT CGCCGTCAAC GGCAAGCTGC TGCGCGTCTC CATGGAGCTG ATAACCTCGG GGGCCAACAT CACCTGGGCC ACCACTGTCC TGAGCCCTGG CGCGTCGGGC GCGTTGTCCG CATCAGGGAC CTTGACTTCG TCGGCAACCG GCAGCGCATA CGGCGTCGTC ATCAACCCCG ATGGTCACAT CAACGACACG GCCATCGGTC ACGTCTCCTA CCAGTCCGTT TGGGACAGCC TGTTCAACCT GGCGCAGCCC TTGAATGCCT GGATCGGCGA GGCCACAGCT GACCGATTTG TGCGATTGAA CTTCGAGGAA CCTGGCGTGA GCGCGTCAGC AGCGCTTACC GGTTCAGTTT TTGACGACTC CGTGACCATG GGGTACCAGC TGTCGGACAC TTTTACCAAC CTCGTTCAGC AGGTCGTGGA CACCGATGGC GGCATCCTGT TCGAGGCCCG TGACCAAGCC GAACTGGTTC TCCGTAAGCG TGTATCGCTG TACAACCAGA GTCCGCAGTT GACCTTGGAC GTCTCCGCTC ACCAACTGTC GGCACCGCTG GCCCCGCTGG ACGACGATCG GTTTACCCGA AACGACATCA CCGTCAGCCG GATTAATGGA TCTTCGGCCA GGCAGGCGCT GACCAGCGGG GCCATGTCGA CACAGTCGCC GCCGTCTGGT GTCGGGCCCT ACCCGAACGG CGTCAGCATC TCCGTCGGCG GCGATGCCCA ACTCACTGAT CAGGCCGGCT GGCGGCTGCT ACTGGGCACT GTTGACGAGC CCCGCTATCC GTCGATCTCG CTAAACCTGC GCCATCCCAC CTTCACTTCG AACCCGGCAC TCCTGGTCGC AGCGCTCACC ATGGACATTG GCGACCGTGT CGCGGTTTTG AACCTGCCGG GTTGGTTGCC GCCGGATCCG ATCTCGCAGG TGCTGCAGGG CTACTCAGAG ACGCTGGGCG TGTTCGAGCA CGACATGGCG CTGAACTGCA GCCCGGAAGC GCCCTACCGC ATTGCGGTGC TTGACGACTC GGTGCTGGGG CGCCTGGATA CCGACGGGTC TCACCTGGCG GCGAATTACG GCCCGACCGA CACGACGCTT GTGGTCACCA CAGCCGGCGC CGCGTTCGGC AACTCGCCGC TGTGGACGAC CAGCGCCGGT GATTTCCCTT TCGATATCGC GGTTGGCGGG GAGCGCATGA CGGTCACGAA TATCGTCGCG TCCACGCCGC CCTACCACCA GATATTCACC GTGATCCGAT CCGTCAACGG TGTCGTCAAA TCCCAGGCCA CGTTCACCGA TGTCCGGCTG TGGCAGCCCA TGGTCTTGAG CCTCTAG
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Protein sequence | MNPAGQPFDT GPGGPIGIRV EIMLDPSGND WTDITPYVYY RDRIRITRGR PDETSGAQPQ TCTLTLNNRD GRFTPKNPLG PYYGVLGRNT AIRVSRLVNG SNDPWYRFYG EVPSWPTTWD ISGSDVYTQI QASGILRRLN QGNVPEGSAM RRAYTLSAGV SSAVAYWPCE DGQTATSLAS ALAWPTGTAL TLSGQAPPSL SNFTGFLCSD SLPLLSASIW NGAIPADPFN GTDNVLRFLL AVPATGAFDT AVIARLFTSG RVARLDLQYG SASNGSLQIS GYSVSGTLLF SSGYVGFAVN GKLLRVSMEL ITSGANITWA TTVLSPGASG ALSASGTLTS SATGSAYGVV INPDGHINDT AIGHVSYQSV WDSLFNLAQP LNAWIGEATA DRFVRLNFEE PGVSASAALT GSVFDDSVTM GYQLSDTFTN LVQQVVDTDG GILFEARDQA ELVLRKRVSL YNQSPQLTLD VSAHQLSAPL APLDDDRFTR NDITVSRING SSARQALTSG AMSTQSPPSG VGPYPNGVSI SVGGDAQLTD QAGWRLLLGT VDEPRYPSIS LNLRHPTFTS NPALLVAALT MDIGDRVAVL NLPGWLPPDP ISQVLQGYSE TLGVFEHDMA LNCSPEAPYR IAVLDDSVLG RLDTDGSHLA ANYGPTDTTL VVTTAGAAFG NSPLWTTSAG DFPFDIAVGG ERMTVTNIVA STPPYHQIFT VIRSVNGVVK SQATFTDVRL WQPMVLSL
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