| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2734 |
|---|
| Symbol | |
|---|
| ID | 8334083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3131930 |
|---|
| End bp | 3132499 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644955883 |
|---|
| Product | (2Fe-2S)-binding domain protein |
|---|
| Protein accession | YP_003113489 |
|---|
| Protein GI | 256391925 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.880035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.369007 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCG AGATCACCGT GCAGGTCGAC GGGGTTCCAC GCCGGTTGAC CGTCGACACG
CGCTCGACGC TGCTCGATGT CCTGCGTGAA CGGCTGGCGG TGACGAGCGT CAAGAAGGGC
TGCGACCACG GGCAGTGTGG CGCGTGCACG GTGTTGTCCG GCGGACGGCG CGTGCTGAGC
TGCCTGGTGC TCGCGGTCAC CCAGGACGGA GCTCAGGTCG TCACCGCCGA AGGGCTCGCG
TCCTTGGCGG CTGCCGATGA CGGGCAGCTC GGCGACGATC TGCATCCGAT GCAGCGGGCC
TTCATCGACT GCGACGCGTT CCAGTGCGGC TACTGCACCC CGGGACAGGT CGTCTCCGCG
GTCGGGATGC TCGACGAATT CGCGCGGGGC TGGCCGAGCG CCGTCACCGG CGGCACGGGA
GCACCGCGCC TGGACCACGC CGAGGTGGCC GAGCGAATGA GCGGCAACCT GTGCCGCTGC
GGAGCCTATG TCAACATCGT GTCCGCCGTT CACCAAGCCG CCGAGGCGTC CTCCGCCCAG
CGGACGGCCG GGACGGAGTC GGCCGGATGA
|
|---|
| Protein sequence | MDTEITVQVD GVPRRLTVDT RSTLLDVLRE RLAVTSVKKG CDHGQCGACT VLSGGRRVLS
CLVLAVTQDG AQVVTAEGLA SLAAADDGQL GDDLHPMQRA FIDCDAFQCG YCTPGQVVSA
VGMLDEFARG WPSAVTGGTG APRLDHAEVA ERMSGNLCRC GAYVNIVSAV HQAAEASSAQ
RTAGTESAG
|
|---|
| |