| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2698 |
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| Symbol | |
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| ID | 8334047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3093964 |
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| End bp | 3095370 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644955848 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003113454 |
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| Protein GI | 256391890 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.73028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGG CCGCCGCGAG CGCGGGTCCC CGGCCCCGTG TCGCCGCGAC GCTGGTCCTG
GCCTCGATCG GCGCCTTCGT CACGTCGCTG GACGTCGTGG TCGTCGCGAC CGCGCTGCCG
TCGCTGAAGG CTCATCTGGG TGCGAGCCTG TCCGATCTCG AGTGGACGAT CAACGCCTAC
AACCTCGCGT TCGCCTCGCT GATGCTCACC GGAGCCGCGC TCGGGGACCG TTTCGGACGC
CGAAGGATGT ACGTCGTCGG CCTGGCGGTG TTCACCGGCT CGTCCGTCGC GTGCGCGACC
GCGGGCAGCG TGGGGGTGCT GATCGCGGCG CGGGCGGTGC AAGGCGCTGG CGCGGCCGTC
GTGCTGCCGC TGTCGCTCAC GTTGATCAGC GAGGCGTTCC CGCTGGAGAA ACGGGGCGCC
GCGATCGGGA TCTGGGGCGG TGTCACCGGT CTGGGCGTCT CCGTCGCTCC GCTGGTGGGC
GGTGCAGTCA TCCAGGGCAT CGACTGGCAG TGGATCTTCT GGATCAATGT GCCGGTCGGC
GTGGTCGCTG CGGCGGCCTC CGCGGTCCTG TTGAAGGAGA GCCGGGGTCC GCGCCCGCGG
TTGGACCTGG TCGGCCTGCC GCTGATCGCG GTCGGGCTGC TCGCTCTGGT CTGGGCGCCG
GTCCGGGCGC CGTCGGTCGG ATGGGGCAGC GGCGAGGTGA TCAGCGCACT GATCGTCGGC
GCGGTCCTGA TCGCCGCGTT CGTGGTCTGG CAGAGCCGGG CGCCGTTGCC GATGATGCCG
CTGGAGTACT TCCGCGACCG CGCGTTCTCC TCGGCGGGCG CGGTGGCCGT CCTGTTCTCC
TTCGCGCTGA TCGGAGCGGT GTTCTGGATC GCGCAGATGC TCCAGGTCGG CATGGGCTAC
TCCCCCTTCG CCTCGGGGAT CCGCATGCTG GTGTTCACCA TGATGCCGAT GGTCTTCGCC
CCCTTGGGCG GCATCGGCGC CGACAAGGCC GGCAACCGCC CGTTCATGGT CGGCGGCCTG
CTGATGATGG GAGCCGGGTT CCTCTGGCTG GGGCTGACGG TCAAGGCCGG CGTGGGCTAC
ACCTCGCTCG TGGCTCCGTT CGTCGTGGCG GGCATCGGCA TCTCCTTCGT CTTCCCGACG
CTGGGCAACG CCGCGATCGG CGCGGTGCCG CCCGCCGACT CGGGAGTGGC AGCCGGCGCC
AGCAACACGA TGCGGGAGAT CGGCGGGCTG TTCGGGGTGG CGATCCTCGC CGCCGTCTTC
ACGGCCAACG GCAGCTACGC CTCGCCGGCG GCGTTCATGC ACGGGAGCAG ATACGCGATC
GTGGTCGCCG GTGTGGTGGC CCTCGCCGCG GTGATCCCGG CGCTGCTCGG CCCGTCCAGA
AGCGAGGCGA TCGCCGCTGC CGAGTAG
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| Protein sequence | MSEAAASAGP RPRVAATLVL ASIGAFVTSL DVVVVATALP SLKAHLGASL SDLEWTINAY
NLAFASLMLT GAALGDRFGR RRMYVVGLAV FTGSSVACAT AGSVGVLIAA RAVQGAGAAV
VLPLSLTLIS EAFPLEKRGA AIGIWGGVTG LGVSVAPLVG GAVIQGIDWQ WIFWINVPVG
VVAAAASAVL LKESRGPRPR LDLVGLPLIA VGLLALVWAP VRAPSVGWGS GEVISALIVG
AVLIAAFVVW QSRAPLPMMP LEYFRDRAFS SAGAVAVLFS FALIGAVFWI AQMLQVGMGY
SPFASGIRML VFTMMPMVFA PLGGIGADKA GNRPFMVGGL LMMGAGFLWL GLTVKAGVGY
TSLVAPFVVA GIGISFVFPT LGNAAIGAVP PADSGVAAGA SNTMREIGGL FGVAILAAVF
TANGSYASPA AFMHGSRYAI VVAGVVALAA VIPALLGPSR SEAIAAAE
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