Gene Caci_2687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2687 
Symbol 
ID8334036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3080726 
End bp3082000 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content69% 
IMG OID644955837 
ProductCyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_003113443 
Protein GI256391879 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0170883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.949284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCAAT CCCTGGACAA CCCAGCTGTC GGCGTCACGG CGGCGCGTCA GTCCGTCCCG 
TTCGCCGTGG CGGCCCAGCC TGGTGGTGGG CTGCTGCGGG CGAAACTGGC CGAGCGGTTG
TTCCGCTCGG CGACGGCCCG GTTGCCGTTG ACAGTCCGTT ACCCCGACGG CCGGGTCGAG
GGTGCGGGGC GCGACGGCTC CCCGGTCATG GTCCTGCACG ACCCGCGCGG CTTCTTCCAC
CGCCTGGGAA CCGCGCGGCT GATCGGGTTC GGGGAGTCCT ACCAGGCTCG GGAGTGGGAC
AGCACCCAGC TGGCTGAACT GCTCGCAGTG TTCGCCGCCG AGTTGCCGCG GCTCGTTCCG
GCACCGCTGC AATCCTTGCG CCGCGCTTTC GACCTGCGCC GCCCCGGCGG TGCGGCGAAC
TCGCTGCGCG GCGCGCGTCG CAACATCGAG CACCACTACG ACCTGTCTGA CGAGCTGTTC
GAATTGTTCC TCGACGAAAC GATGACCTAC TCCGCGGCGT TGTTCCATCA GAACCCGCTC
GGCAGACCTG ACGGCGGCTT CGCCACGCTC GCAGATGCCC AGTGCCGCAA GATCGACCGG
CTGCTCGACC TGTGTGGCGT CGGTCTGGGT ACCCGGTTGT TGGAGATCGG GAGTGGATGG
GGGAGCCTGG CGTTGCGCGC GGCGGCTCGC GGTGCTCAGG TGACCACGAT CACGCTGTCG
TCGAATCAGC ATGATGCTGT CCGCCGGCGT GCCGACGCAG CGGGTCTGGG CGACCTGGTC
GACGTCCGGC TCATGGACTA CCGCGCCGTG CAGGAGCGTT ACGACGCGGT GGTCAGCGTG
GAGATGATCG AGGCGGTCGG GCGCGAGCAC TGGCCCACGT ATTTCCGTGC CCTGCGCCGT
CTGACCGCTC CCGGCGGCCG GATCGGACTG CAGGCGATCA CCATGCCGCA CGAGCGCATG
GTCGCGGCGG CCGGCAGCCA GACCTGGATC ACCAAGTACA TCTTCCCCGG CGGCATCATC
CCGTCCCAGA CCGCCATCGA CTCCGAGTCG CAGGCTGCCG GCCTGCACAT GCTCCACGAC
TTCTCGTTCG GCAGGCACTA CGCCCACACG CTGCGGTTGT GGCGCGACCG CTTCAGCGAG
CAGCGCGAAG CGGTGGCCGC CCTCGGCTTC GACGAGACCT TCCGCCGCAC CTGGGAGCTG
TACCTGGCCT ACTCCGAGGC GGGCTTCGCC GCGGGCTATC TCGACGTCCA CCAGATGGTG
TTCGCCACCG ACTGA
 
Protein sequence
MEQSLDNPAV GVTAARQSVP FAVAAQPGGG LLRAKLAERL FRSATARLPL TVRYPDGRVE 
GAGRDGSPVM VLHDPRGFFH RLGTARLIGF GESYQAREWD STQLAELLAV FAAELPRLVP
APLQSLRRAF DLRRPGGAAN SLRGARRNIE HHYDLSDELF ELFLDETMTY SAALFHQNPL
GRPDGGFATL ADAQCRKIDR LLDLCGVGLG TRLLEIGSGW GSLALRAAAR GAQVTTITLS
SNQHDAVRRR ADAAGLGDLV DVRLMDYRAV QERYDAVVSV EMIEAVGREH WPTYFRALRR
LTAPGGRIGL QAITMPHERM VAAAGSQTWI TKYIFPGGII PSQTAIDSES QAAGLHMLHD
FSFGRHYAHT LRLWRDRFSE QREAVAALGF DETFRRTWEL YLAYSEAGFA AGYLDVHQMV
FATD