Gene Caci_2668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2668 
Symbol 
ID8334017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3055266 
End bp3056102 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content71% 
IMG OID644955819 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003113425 
Protein GI256391861 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCAG CTGTCGATCT GCTCCGCGTA CCCGTCAACG GGATAGAGGT GAACGTCGCC 
GTCTGCGGAA CGGGCCCGGA AGTGTTACTG CTGCACGGAT TCCCGCACAC CTGGCAGCTT
TGGAGCTCGG TCATGGGACC GCTGTCCGAC CAGTACCGGG TCATCGCCCC AGACCTGCGC
GGCCTCGGCG CCACCACCCG CGCCGCCGAC GGCTACGACG CCGAAAACCT CGCCGCCGAC
GCCGAAGGGC TGCTGGCCGC CCTGAACGTG GACTCCGCCG CGGTCGTCGG CATCGACGCC
GGCACACCTC CGGCGTTCCT GCTGGCGATG CGCCGGCCCG ACCTTGTCCG CCGCCTGGTC
CTCATGGAGG CGTTCCTGGG CCGCCTACCC GGCGCGGAAG ACTTCCTCCC CGCCGGGCCG
CCGTGGTGGT TCGGCTTCCA CGCCGTACCG GGACTGGCCG AACAGGTGCT GGCCGGTCAC
GAGCCCGAAT ACGTGGACTG GTTCCTGACG GCCGGGACCC AGGGCCGTGG CATCCCCGCC
GAGGTCCGCG ATGCGTTCGT CGCCGCGTAC ACCGGGACCG AGTCCCTGCG CTGCGCCTTC
GAGCACTACC GCGCCATGCC CGCCACCGCA CGCCAAATCC AGGCCGCCAC GCTCGCCGGC
CGCCTGTCCG TCCCCACGCT CGCGGTCGGC GCGCACCCGG TGGGCCCGGC GCTGTATCAC
CAACTGCGGC AGGTCTGCGA CGACGTCACC CGACTCGACA TCGCAGAGTG CGGACACATC
ATCCCGCTGG ACCGGCCCGC AGCCCTGCTC ACCGCGCTGA CCGACTTCCT GCCCTAA
 
Protein sequence
MPAAVDLLRV PVNGIEVNVA VCGTGPEVLL LHGFPHTWQL WSSVMGPLSD QYRVIAPDLR 
GLGATTRAAD GYDAENLAAD AEGLLAALNV DSAAVVGIDA GTPPAFLLAM RRPDLVRRLV
LMEAFLGRLP GAEDFLPAGP PWWFGFHAVP GLAEQVLAGH EPEYVDWFLT AGTQGRGIPA
EVRDAFVAAY TGTESLRCAF EHYRAMPATA RQIQAATLAG RLSVPTLAVG AHPVGPALYH
QLRQVCDDVT RLDIAECGHI IPLDRPAALL TALTDFLP