Gene Caci_2657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2657 
Symbol 
ID8334006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3043685 
End bp3044965 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content76% 
IMG OID644955808 
Producthistidine kinase 
Protein accessionYP_003113414 
Protein GI256391850 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.803775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGCA TCGGCGGATG GGGCTCGTCG GGCTCGACCG GCTCGCCGGG TCCGGCCGTC 
CACGGCTTGG ATCTCCTCGG CGCGGCGCTG GCGTTGGCGT CAGCGCTTCC GCTCCTCCTG
CGCCGGAGCG CGCCGCTGGC GGCCTACGTG CTGACCAGTG CGGCGAGCGT GGCGTTGGTA
GAGCTCGGAT ACTCCCTCGA CGCGCCGATC GCGCAACTGG TCGCGGTCTA CACCCTCGCC
GGGACCTTCG ACGGCGAGCA GCAGCGCCGG CGGCGGTGGC CGGTGATGGC CGCCGCGGCA
GTGTTCATCC CGCTGACCGC GGGGGTCTAC GCCGGCCGCG GCGACGGGGT GCGCGACGCG
CTTCCGGCGA TGGTCGGCTG GGCGCTGGTG TTCGTCGGCC TGTGGATCGC CGGGGAGCCG
GGCAGGTGGC GGCGCTGGGC GGCGATCCTG GCCGCCGCGG TCTTCATCCC CGGGACCGTC
GCCTCCTACG CCGCCCGCGA CGCCGACGCC GGAGTGGTCG TGCCCGCGAT GGCGAGCTGG
GCGCTGGTCT TCAGCGGCGT GTGGATCGCC GGCGACCGGG CCCGCTACCG CCGCCGGCGG
CTGGCCGAGC TCCAGGAGCG GGCCGAGCGC GCCGAACGGG ACGCCGAACG CGACCGGCGG
CTGGCCGCCG CCGAGGAGCG GACGCGGATC GCCCGCGAAT TGCACGACTC CGCCGGGCAC
GCCATCAACG TGATCCTGGT CCAGGCCGGC GCGGCCCGGC TGCTCCACGA TCGGGATCCG
GCGCGCTCCC GGCAGGCCGT GGAGGTCATC GAGGACGTGG CGCGCGCCAC CCTCACCGAG
ATCGGCCACC TGGTGCTGGC CCTGCGCGAG GACCAGGGGA TCCAGCCGCC CGCGCCGGTC
GAGCCGGCCG CCTTCGAGGA GCTGCTGGAG CGCCACCGCG ACAACGGTCT GACCATCGCC
GCCGATGTGC ACGGCTCCCG CGAGGCCCTG CCGGGCAGCG TCGCGTGGGC GGCGTACCGG
ATCCTGCAGG AGGCGCTGAC GAACGCGGCC CGCCACGGTC CCGGGAACGC CGAGGTGGTC
CTCGCCTTCG GGACCGAAGC CGTCGAGGTC ACCGTTACCA ACCCGGCGCT CGCCCCGGCC
GCCGCGCCGG CCTCCGGCGG CCACGGGATC ATCGGCATGC GGGAGCGCGC CCTGCTGCTG
GGCGGCACGC TGCACGCGCA GGCCACGGGA GCCGGCTTCC GGCTGCACGC CCGGCTCCCG
AAACGGCGGG AGGCGGCGTG A
 
Protein sequence
MLGIGGWGSS GSTGSPGPAV HGLDLLGAAL ALASALPLLL RRSAPLAAYV LTSAASVALV 
ELGYSLDAPI AQLVAVYTLA GTFDGEQQRR RRWPVMAAAA VFIPLTAGVY AGRGDGVRDA
LPAMVGWALV FVGLWIAGEP GRWRRWAAIL AAAVFIPGTV ASYAARDADA GVVVPAMASW
ALVFSGVWIA GDRARYRRRR LAELQERAER AERDAERDRR LAAAEERTRI ARELHDSAGH
AINVILVQAG AARLLHDRDP ARSRQAVEVI EDVARATLTE IGHLVLALRE DQGIQPPAPV
EPAAFEELLE RHRDNGLTIA ADVHGSREAL PGSVAWAAYR ILQEALTNAA RHGPGNAEVV
LAFGTEAVEV TVTNPALAPA AAPASGGHGI IGMRERALLL GGTLHAQATG AGFRLHARLP
KRREAA