Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2626 |
Symbol | |
ID | 8333975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3009655 |
End bp | 3011220 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644955778 |
Product | amino acid permease-associated region |
Protein accession | YP_003113384 |
Protein GI | 256391820 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCC CATCAGTTCC CCCTGCCTCC GAGCACCACG CCCCCGAGCA CCCCGCCCCC GAGCGTCTGC GCCGAGGCGC GCTCGGCGTC GTCGACATCG CCGCCTCCAC CATGGCGAAC ATCGGCCCGG CCATGAGCTT CTTCTTCGGC TTCGCCTTCC TGGCCTCCAC CGCCGGCGTC GCCTCGCCCC TGACGATCGT CGTCGCCGGC ATCGCCATCG CGCTGCTCGG CAACACCCTG TCCCAGTTCT GCCGGGCCCT GCCCTCGGCC GGCGGGTTCA TCACCTACAT CGGCAAGGGC TTCGGGCCGC GCAGCGCCGT CACCACCGCG CTGGTCGCCA TCACCGGCTA CATCATCGCG ATGGCGTCGA TCATCGCGAT CTCCGGCGGG TTCCTGGCCA TCGCCGTCAA GCGCTACGCG CACGTCACCA TCCCCTGGGG CATCCTGACG CTGATCCTCA CGGCGCTCGC CGTCGCCGTC ATGATCAGCG GCGTCGCGGT CTCCACGAAG GCCGCCGGGC TCTTCTTCGC CTTCGAGATG GTCGTGCTCG TCGTCGTCTC CGTCGTCGTC ATCATCAAGC ACGGCGCGCA CCTGTCCCTC ACGCCGTTCG AGCCGAAGCA CATCAACAAC GGGTTCTCCG GACTGGCTGC CGGATTTCCG CTGGCGATTT ACATGTTCAT CGGCTGGGAG AACTCCGCGG CGCTCGCCGA GGAGACCGAC CATCCGCGGC GGGACGTGCC TCGCGCGGTC TTCACCTCGA TCGCGGTCAT GGTCGTCAGC TATCTGCTGT TCGCTTATGC GACCGTCACA GGGTTCGACT ACAACGTCGA CAAGCTCTCG CAGGCGACGG TGCCGTTCAT CTCGGTCGCC GATGGGACGC TCGGGGTGTT CGCGTTCTTT GCCTACCTCG CCGGGCTCAC CTCGACCCTC GGCGCGCTCA TCTCCGGGAC GAACTCGCAA GCCAGGCTTC TGTTCAACGC CGGGCGCGAA GGGCTGCTCG CACGCTGGAT CGGACGGGTG GACCCGGTGC GCCGGACGCC GGTCAACGCC ACGTTCGTCT ACGTCGCGAT CTCCCTGCTG GTCATCGGCG GCTGGGCGCT CGGGCACGTC GTGGGCGGGT CGACCGGGCA TCTGGACGCC ATCACGTTCT TCTCAGAGTC CGGGACCATG GGCACGATCC CGGTCCTGGT CGTGTATCTG TTCACGAACC TCGCGCTTCC GGTCTACTAC CGGCGTCACC GGCGCGAGGA GTTCTCGGCG CTGCGCCATG CGGTGTTTCC GGTGCTCGGT GCGGCGGTCA TCGTCGTGCC GCTGTACTAC CTCGGCAAAT CCGGTCAGGC GGCGCCTTAC AGCTGGTTCC CCTGGGCCGC CCTTGCACTC GTCGCGGTCT CCGCGCTCTA TGCGTTCTAC GCCGTGCGGC GCGACCCCGG CTTGGCCGAT CGTGTCGGCT CGATTCTCGC CGACGATCGG GCGCCGGCCG AGCTTGCCGA ACCGACCGGC GGACCGGCGC CGGTCCCTGA TCCCGTCATC ATCACCTCCC CCGCACCAAC CGGAGAAGTT CTGTGA
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Protein sequence | MTVPSVPPAS EHHAPEHPAP ERLRRGALGV VDIAASTMAN IGPAMSFFFG FAFLASTAGV ASPLTIVVAG IAIALLGNTL SQFCRALPSA GGFITYIGKG FGPRSAVTTA LVAITGYIIA MASIIAISGG FLAIAVKRYA HVTIPWGILT LILTALAVAV MISGVAVSTK AAGLFFAFEM VVLVVVSVVV IIKHGAHLSL TPFEPKHINN GFSGLAAGFP LAIYMFIGWE NSAALAEETD HPRRDVPRAV FTSIAVMVVS YLLFAYATVT GFDYNVDKLS QATVPFISVA DGTLGVFAFF AYLAGLTSTL GALISGTNSQ ARLLFNAGRE GLLARWIGRV DPVRRTPVNA TFVYVAISLL VIGGWALGHV VGGSTGHLDA ITFFSESGTM GTIPVLVVYL FTNLALPVYY RRHRREEFSA LRHAVFPVLG AAVIVVPLYY LGKSGQAAPY SWFPWAALAL VAVSALYAFY AVRRDPGLAD RVGSILADDR APAELAEPTG GPAPVPDPVI ITSPAPTGEV L
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