| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2622 |
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| Symbol | |
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| ID | 8333971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3004944 |
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| End bp | 3006257 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644955774 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003113380 |
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| Protein GI | 256391816 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0574924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.833644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGCCA CTCCTTTGAA CGCCGCAGCC TCACGCCGCT CGTTCCTCCT CGGCGGCCTG
TCCATAGTCG GCGCGGCCGC CCTGTCCGGG TGCAGCGTCA CCGGCACCTC GCAGAAGAAG
GGCTCCGCGG GCTCCGGCTC CGGCACCATC AATGTCCTGT TCATGCAGCA GGCCGGCTAC
AGCACCGACG ACGTCACGAA GATGACCGCC GCGTTCACCA AGCAGTACCC GGACATCAAG
GTCAACCCCA CCTACGTCGC CTACGAGGCG CTGCACGACA AGATCGTCAC CGCCGCCGCG
GCCGGCACCT ACGACGTGGT GCTCATCGAC GTCATCTGGC CGGCGGAGTT CGGCAAGAAG
AACATCGTCG CCGACGTCAC CTCCCGCTAC CCGGCGGACT GGAAGGACAC GATGCTCGGC
GGCGCGCTGC TGACCGCCGA CTACGACGGC AAGCAGTACG GCGTGCCGTG GGGGATGGAC
ACCAAGTTCT TCTACTACAA CAAGGCCCTG CTGGCGAAGG CCGGCGTCGA CGCCTCCACG
CTGGGCACTT GGAGCGGCGT GCTCCAGGCG GCCAAGGCGC TGAAGCAAGC CAAGGTCGTG
GAGTACCCGC TGGCGTGGAG CTGGTCGCAG GCCGAGGCCA TCATGTGCGA CTACACGCAG
CTGGTCGGCG CGTTCGGCGG GTCGTTCACC GACAGCGCCG GCAACCTCAC CCTGAACAAG
GGCGGCGCGG TGGACGCGCT GGCCTGGATG CGCCAGAGCA TCGTCGACGG TCTGACCAAC
CCCTCCTCCA CCACGTTCCT GGAAGCCGAC GTGGAGAAGA CGATGAACAA CGGCCAGGCG
GCGTTCGGTC TGAACTGGAC CTACTACCTG GGCTCCTCCA ACGACCCGAA GAACTCCCAG
GTCCCCGGGC AGATCGTGGT CGCCCAGACC CCGGCCGGCC CGAGCGGGAA GCGCCCGGGC
GTCAACGGCG CGATGGCGCT GTCGGTGTCC ACGGGCAGCA AGAACCAGGA CGCCGCCTGG
AAGTACATCT CCTGGATCGC CGGGGAGGAC CAGGTCGACC AGTTCGCCAA GGACGAGATG
CCGATCTGGA AGAAGTCCTT CACCACCCCC TCGGTGGTCT CCTCGGCGCC GGACATGTTC
GCCGTCGCCG CCAAGCAGCT CGACGACCTG GTCGTGCGCC CGCAGTTCGT GAACTACAAC
GCGGTCTCCC AGGTCATCCA GGTCGAGCTG CAGAACGCGC TGCTGGGCAA GAAGCCCGCG
CAGCAGGCGC TGGACGACGC GGTGAAGGCC GCGCAGCCGC TGATGGGGGG CTGA
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| Protein sequence | MNATPLNAAA SRRSFLLGGL SIVGAAALSG CSVTGTSQKK GSAGSGSGTI NVLFMQQAGY
STDDVTKMTA AFTKQYPDIK VNPTYVAYEA LHDKIVTAAA AGTYDVVLID VIWPAEFGKK
NIVADVTSRY PADWKDTMLG GALLTADYDG KQYGVPWGMD TKFFYYNKAL LAKAGVDAST
LGTWSGVLQA AKALKQAKVV EYPLAWSWSQ AEAIMCDYTQ LVGAFGGSFT DSAGNLTLNK
GGAVDALAWM RQSIVDGLTN PSSTTFLEAD VEKTMNNGQA AFGLNWTYYL GSSNDPKNSQ
VPGQIVVAQT PAGPSGKRPG VNGAMALSVS TGSKNQDAAW KYISWIAGED QVDQFAKDEM
PIWKKSFTTP SVVSSAPDMF AVAAKQLDDL VVRPQFVNYN AVSQVIQVEL QNALLGKKPA
QQALDDAVKA AQPLMGG
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