| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2613 |
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| Symbol | |
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| ID | 8333962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2996512 |
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| End bp | 2997408 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644955765 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003113371 |
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| Protein GI | 256391807 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.68402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGACC AGACTGGGCG CGTCGCGGTG GTCACCGGCG CCACCTCCGG AATCGGGCTC
GAGACCGCAC GGGTGCTCGC CGAGCGCGGC GCAAAGGTGG TGCTGGCCTG CCGCTCTGCC
GAGAAAGGGC GCGCTGCGGC GGCCGGAATC GCCGCCGGAC TGCCCACGTC GGTGGCAGCT
GAGCCCGAGG TCGTGGAGCT GGATCTGGGA TCGCTCGCCT CCGTGCGGCG CGCCGCCGAG
GAGTTGCGGG AGCAGCATCC GCAGATCGAT CTGCTCATCA ACAACGCCGG CGTGATGGAC
GTACCGTTCG GGACCACCGA GGACGGCTTC GAGCTGCACC TCGGCATCAA CCACTTCGGC
CACTTCGCCC TCACCGGCCT GCTGCTCCCG CGGCTCATGG CCGCACCCGA CGCGCGAATC
GTCACCGTCA GCAGCCTGGT TCACACGCGC GGACGCATCG ACTTCGACGA CCTCGGCTAC
CACCGCGCGT ACAAGCCTGA CGCCGCCTAC TGTCGCTCCA AGCTGGCCAA CCTGCTCTTC
ACCTTCGAAC TGCAGCGCCG CCTCGCCGCC GCCGGACTGC CCGCCGTCGC GCTGGCCGCG
CACCCCGGCT TCTCGCGCAC GGAGCTGTTC CGCCACGAGT CATTCGTCCT CAAGGCCGCG
ATGCTGGCCG TCGGCCCGTT CATGATGCAG AGCGCTGCGA TGGGCGCTCT GCCCACCCTG
CGCGCGGCGG CCGACCCGCA CGCCCTCGGC GGCACGTACT ACGGCCCGGG CGGCCGCAAA
GAGCAGACAG GCCACCCGAT CGTGGTCGAG GCGAGCCGGG CCGCACATGA CGACGAGGCG
CAGCGACGGC TCTGGGCGGA GTCCGAGAAG CTGACGGACG TCGTCTTCCC TTTCTAA
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| Protein sequence | MPDQTGRVAV VTGATSGIGL ETARVLAERG AKVVLACRSA EKGRAAAAGI AAGLPTSVAA
EPEVVELDLG SLASVRRAAE ELREQHPQID LLINNAGVMD VPFGTTEDGF ELHLGINHFG
HFALTGLLLP RLMAAPDARI VTVSSLVHTR GRIDFDDLGY HRAYKPDAAY CRSKLANLLF
TFELQRRLAA AGLPAVALAA HPGFSRTELF RHESFVLKAA MLAVGPFMMQ SAAMGALPTL
RAAADPHALG GTYYGPGGRK EQTGHPIVVE ASRAAHDDEA QRRLWAESEK LTDVVFPF
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