Gene Caci_2575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2575 
Symbol 
ID8333924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2920230 
End bp2920781 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content67% 
IMG OID644955728 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003113334 
Protein GI256391770 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGCG CGCTGGCCGT CCTTGCCGAA GAGGGCGTGG CTGGTCTGAC CGCACGGACG 
GTCGCACGCC GTGCCAGCGC CTCCGTCCCG GCGATCTATG AAGTCTTCGG CGATAAAGGC
GGCCTGATCC GCGAGGTCTA CTTCGAAGGC TTTCGTCTGC TCGGCGCGCA GCTCGCGCAA
GTTCCGCCGA CTCCAGACCC GCTGGAGGCG CTTCTCAACG TCTGCGAATC GTTCCGGCAG
TTCGTCCTGG CCAATCCGGT GCTCGCGCAA ACCATGTTCT CGCGGCCCTT CGTCGACTTC
AGCCCGACAA CCGACGACAA CAAAGCCGGG CTGTCGGTGA GCAAGGTCTT CGTTCGCCGG
ACCCGGGCAG CGGTTGAGGC GGGACGGCTC GTCGGCGATC CGACGGACAT CGCGCACCTG
TTCTTCGCCT GTGTGGAGGG CCTTGCCGCA GCTGAGAGCG CGCATCGCCT CGGGGGGTCG
AAAGCCGTCG TCGATCGACG CTGGCGCTTG GCTCTGGACA CACTTGTCCG GGGACTTGCG
GCGCCACGCT AA
 
Protein sequence
MASALAVLAE EGVAGLTART VARRASASVP AIYEVFGDKG GLIREVYFEG FRLLGAQLAQ 
VPPTPDPLEA LLNVCESFRQ FVLANPVLAQ TMFSRPFVDF SPTTDDNKAG LSVSKVFVRR
TRAAVEAGRL VGDPTDIAHL FFACVEGLAA AESAHRLGGS KAVVDRRWRL ALDTLVRGLA
APR