Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2575 |
Symbol | |
ID | 8333924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2920230 |
End bp | 2920781 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644955728 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003113334 |
Protein GI | 256391770 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCAGCG CGCTGGCCGT CCTTGCCGAA GAGGGCGTGG CTGGTCTGAC CGCACGGACG GTCGCACGCC GTGCCAGCGC CTCCGTCCCG GCGATCTATG AAGTCTTCGG CGATAAAGGC GGCCTGATCC GCGAGGTCTA CTTCGAAGGC TTTCGTCTGC TCGGCGCGCA GCTCGCGCAA GTTCCGCCGA CTCCAGACCC GCTGGAGGCG CTTCTCAACG TCTGCGAATC GTTCCGGCAG TTCGTCCTGG CCAATCCGGT GCTCGCGCAA ACCATGTTCT CGCGGCCCTT CGTCGACTTC AGCCCGACAA CCGACGACAA CAAAGCCGGG CTGTCGGTGA GCAAGGTCTT CGTTCGCCGG ACCCGGGCAG CGGTTGAGGC GGGACGGCTC GTCGGCGATC CGACGGACAT CGCGCACCTG TTCTTCGCCT GTGTGGAGGG CCTTGCCGCA GCTGAGAGCG CGCATCGCCT CGGGGGGTCG AAAGCCGTCG TCGATCGACG CTGGCGCTTG GCTCTGGACA CACTTGTCCG GGGACTTGCG GCGCCACGCT AA
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Protein sequence | MASALAVLAE EGVAGLTART VARRASASVP AIYEVFGDKG GLIREVYFEG FRLLGAQLAQ VPPTPDPLEA LLNVCESFRQ FVLANPVLAQ TMFSRPFVDF SPTTDDNKAG LSVSKVFVRR TRAAVEAGRL VGDPTDIAHL FFACVEGLAA AESAHRLGGS KAVVDRRWRL ALDTLVRGLA APR
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