Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2570 |
Symbol | |
ID | 8333919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2910946 |
End bp | 2912661 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644955723 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_003113329 |
Protein GI | 256391765 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTCA CGCGACGTCT CTGGGCAGTT CTCACTTTCG CAGCGCTCGT AGTGGCCGGT ATCGCACCCG CTGCCTCTGC CGGCACGGCG TCCCCGAATA GCACGGCGTC CCCCAATAAC TCGGCGTCCC CCAATACCGC GCCTCAGTAC CGGTTCTCCA CGTACAACAT CTGCGGCAAC CACTGTTCAT CGAGCGACTA CAGCAACACA CAGCGCCTGA GAGTTGTCGA GGACGAGGGA TCCCCGACCG GCGGGAACGC CGACGACATC TTTCTCCAGG AGGTCTGCAA GTCCCAGTTC GACAGCATCG ACGCGCAGTT GAGGACGCGG GGCTACACAG GGCTCTTCGA CCAGACCAAA GCTGTGGGCT CGGGCACCTG CAGCGGCAGC CCATACGGCA TCGCCATGTT CACGAAGGGC GCCGTCGTCC AGACGAAAGT CCTCCACCTG AAGATCGGCG GGGAGCCCAC GGACGAGGAC ATCGCGTCGC CGTGTGTGGA GAGCTTCATC CAGGGTCGGC TCCACTGGGG CTGCTCGGTG CACCTGTACT GGGACTCCAG CACCTACTCC GCGCTTGAGG CGCAGAAGCT GGCGAGTCTC GTGCGGCCCT GGCAGGAGGC GGGAATCCCC GTCGTGCTCG GCGGCGACTT CAACGCCTCG GCGACGACGT CGACCCTCGA CTCCTTCTAC CAGCCCGGAA TGGCCGGCAG TCCGCACGGA AGCTTCCGCG AAGCCGATCA GACAGACAAG AACTACTTCA ACACGTCGAT CTGCACGGCG ACGCAGTCGG ACTGCCGATC CGGCGAACCG ACGTACGTCG ACCTGACGTC TCAGGCCACG AAGAAGATCG ACTATCTGTT CTTCAGCCAG AACGCCTTCA CGAACGTCTC CGGAGACGTG CTGGCGCGTG ACGTGACGGT CTCCGACCAC CGCCTCTACC GCGGTACGGC GACCATGACC AGCGCCTCGA TGGGGGAGAC CACCGACGTC GGGGACCGCA ACGGCGACGG CGTCGACGAT TTCGTGGCGG TCGAGCGCTC CACCGGCGAC CTGTACCTCT ACACCAGCTC CGCCTACTCC GGGGCGAACC GGACGCAGCT CGGCTGGAGC TGGGACACGA TGCGCGATCT GGTCGACGTC GGCGACCACA ACGGCGACGG CATCGCCGAC CTGATCGCCG TCGACACCGC CGACGACCAC ATGTACCTGT ACTCCGGTCC CGGCTTCTCG GGCACGACCC GCGTCGACCT CGGCGGCGGC TGGGACAGCT ACACCGACCT GGCCACCGTC GGGGACCGCA ACGGCGACGG CGTTCCGGAC TTCGTCGCCA CCGACGCCGC CACCGGCAAT CTCTACCTCT ACACGAGTCC TAACTACCTG GGCAGCCAGC GCCAGCAGAT CGGCACCGGC TGGACCGGGA CCCGCGACAT CACCGATGTC GGCGACCACA ACGGCGACGG CCAGGACGAC TTCGTGGCCG TCAACGACAC CGACACCACG ATGTATCTGT ACTCCAGCCC CGGTTTCACG GGCTCCACCC GGGTCGCGCT GGGCGGCGGC TGGGGCGGGT ACGGCGACAT CGCCGCGATC GGCCGGCAGA ACTCTGACAA GCAGGCGGAC TTCGTCGCCA CCGACACCAG CACCGGAAGC CTCTACCTCT ACACGAGTCC GAGCTACCTC GGCAGCCAGC GCCAACAGAT CGGCAGCGGC TGGTAG
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Protein sequence | MSLTRRLWAV LTFAALVVAG IAPAASAGTA SPNSTASPNN SASPNTAPQY RFSTYNICGN HCSSSDYSNT QRLRVVEDEG SPTGGNADDI FLQEVCKSQF DSIDAQLRTR GYTGLFDQTK AVGSGTCSGS PYGIAMFTKG AVVQTKVLHL KIGGEPTDED IASPCVESFI QGRLHWGCSV HLYWDSSTYS ALEAQKLASL VRPWQEAGIP VVLGGDFNAS ATTSTLDSFY QPGMAGSPHG SFREADQTDK NYFNTSICTA TQSDCRSGEP TYVDLTSQAT KKIDYLFFSQ NAFTNVSGDV LARDVTVSDH RLYRGTATMT SASMGETTDV GDRNGDGVDD FVAVERSTGD LYLYTSSAYS GANRTQLGWS WDTMRDLVDV GDHNGDGIAD LIAVDTADDH MYLYSGPGFS GTTRVDLGGG WDSYTDLATV GDRNGDGVPD FVATDAATGN LYLYTSPNYL GSQRQQIGTG WTGTRDITDV GDHNGDGQDD FVAVNDTDTT MYLYSSPGFT GSTRVALGGG WGGYGDIAAI GRQNSDKQAD FVATDTSTGS LYLYTSPSYL GSQRQQIGSG W
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