| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2552 |
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| Symbol | |
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| ID | 8333901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2887373 |
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| End bp | 2889478 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644955705 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_003113311 |
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| Protein GI | 256391747 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTGTTC CCCCGCAACC CGTCGTCCAC GACCCCGCAC GCGGCCTGTG GCTGCTGAGC
ACCCCCGGCT CGCGCTACCT GCTGCGTGAA GATCCCGACG GCAGTCCCCG GCACGTCGCG
TGGGGATCGC CGGAGGCGGT GCACGCCTGC GCGCCGACGG CGCCGGCCAG CAGCTTCGAC
GGCGACGGCG CGGCCGACGA GCTCGGCATC GAGACCGGTG CCCGGTTCGG CCCGGCGGGC
TTGCAGGTCC GGTTCGCCGA CGGCACGCGC GGCGCGCAGT GGACCGGCGC CGGGCACGAG
ATCGACGGCG GGCATCTGGT GATCCGCCTG CGGGACCGGC GTTATCCGCT GCGTGCCGAA
CTGCACTATC GGGTGCGCCC CGACACCGAC GTCATCGAAC GCTGGACGGT CCTGGCCAAC
GACGGCGAGG CGCCGATCAC CGTCGGCCGC CTGGACTCGG CGGCATGGAC GATCCCGCAC
CTCACCGACT ACCGGATGTC GCATCTGGTC GGCGGCTGGA ACCACGAGTT CCAGCTGCGC
CGCACGCAGG TCCCGGTCGC CGAGACGGTC TTCACCAGCC GCCGCGGACT CACCAGCCAC
CACGCGAACC CCTGGCTCGC CGTCGACGAC GGAACCGCCG AGGAGGACCG CGGATCGGTG
TGGAGCACCG CGCTCGCCTG GAGCGGAAGC TGGCGCGTCA CCGTGCACCG CGATCCGGCG
GACCGGGTCA CCTGGACCGG CGGCTTCGGC CACGAGGGCA TCACCTGGAC CTTGGGTCCG
GATCAGAGCC TTGAGACGCC GGTCTTCGCC GGGCTGCACA CCGTCGGCGG CTTCGGCGGC
GCCGCCCGGG CTTGGCACGA CTACCTGCGG CGCTATGTCA TTCCGGCGCC GGCCGAGGAC
CGGCCGGTGG TCTACAACTC CTGGGAGGCG ACCGGCTTCG CGGTGGACGA GGCCGGGCAA
CTGCGGCTGG CCGAGACCGC CGCGCAGCTC GGCGTCGAGC TGTTCGTCCT CGACGACGGC
TGGTTCGGCG GCCGCCGCGA CGACACCGCC GGGCTCGGCG ACTGGCGCCC CTACCCCGGC
GCCTTCCCGC ACGGGCTCGG GCCGCTGGTG CAGAAGGTGC ACCAGCTCGG CATGCGCTTC
GGGCTCTGGG TCGAGCCGGA GATGGTCAAC GCCGACAGCG ACTTGTTCCG CGAGTACCCC
GACTGGGTGG TGCACACGCC GCAGCGCGAC GCGACGGAGC TGCGGCAGCA GCTCATGCTC
AACTACGGCC GCGAGGACGT GGCGCAGTGG GCGCACCAGT GGCTCGACCA GCTGGTGCGC
GAGCATGGCA TCGACTTCTT GAAGTGGGAT GCGAACCGGG CGGTCACTGA CGCCGGCTGG
CCGGGGCACC CTGACCCTGA CCGGCTGTGG ATCGACCACA CTCGAGCCGT CTACCGGATC
ATGGACCGGC TGCGCGCCGA CCATCCGCAG CTGCGGATCG AGGCCTGCGC CGGGGGTGGC
GGGCGTGCCG ACATCGGCGT TCTGGCGCGC ACGGACCAGG TCTGGACGTC GGACAACACT
GATCCGGTGG ACCGGCTCGC GATTCAGAAC GGCTTCAGCA TGCTCTTCCC CGCCGAGGTC
ATGGCGGCGT GGGTCACTGA CAGCCCGAAC ATCGCGACGG GTCGTTCGAC GCCGCTGCGT
TTCCGGTTCC ACGTCTCCAT GGCCGGCGCG CTCGGCATCG GGGGGAAGCT GACCGAGTGG
ACGCGCGAGG AGCTGGCCGA GGCGGCGGAG CTCGTCGCGG TGTACAAGCG GGTTCGCGGG
GTCGTGCAGC ACGGTGTGCT GTATCGGCCG GCGACCGATG GGCACACCGC GGCGGTGCAC
TACGCGTCGG AGGGAGGCGA GGGAGGCGAG GGAGGCGATG AGCATGTGGT CATCGCTTGG
CGGGCTGCGA CAGCGGTCGG ACTACCGGGT CCGCTGGTAC GTCTGACGGC GCTGGATCCC
GACGCCGAGT ACTACGACGT CGATCGGCAG GTGCGGATCA CCGGCGCCGC GGCGCGGGCG
GGGCTCCGTC TGGATCTGCC GCGCGGGGAC TATGCCAGCG CTCTGTATCA CCTGCGGCGG
GTGTAG
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| Protein sequence | MRVPPQPVVH DPARGLWLLS TPGSRYLLRE DPDGSPRHVA WGSPEAVHAC APTAPASSFD
GDGAADELGI ETGARFGPAG LQVRFADGTR GAQWTGAGHE IDGGHLVIRL RDRRYPLRAE
LHYRVRPDTD VIERWTVLAN DGEAPITVGR LDSAAWTIPH LTDYRMSHLV GGWNHEFQLR
RTQVPVAETV FTSRRGLTSH HANPWLAVDD GTAEEDRGSV WSTALAWSGS WRVTVHRDPA
DRVTWTGGFG HEGITWTLGP DQSLETPVFA GLHTVGGFGG AARAWHDYLR RYVIPAPAED
RPVVYNSWEA TGFAVDEAGQ LRLAETAAQL GVELFVLDDG WFGGRRDDTA GLGDWRPYPG
AFPHGLGPLV QKVHQLGMRF GLWVEPEMVN ADSDLFREYP DWVVHTPQRD ATELRQQLML
NYGREDVAQW AHQWLDQLVR EHGIDFLKWD ANRAVTDAGW PGHPDPDRLW IDHTRAVYRI
MDRLRADHPQ LRIEACAGGG GRADIGVLAR TDQVWTSDNT DPVDRLAIQN GFSMLFPAEV
MAAWVTDSPN IATGRSTPLR FRFHVSMAGA LGIGGKLTEW TREELAEAAE LVAVYKRVRG
VVQHGVLYRP ATDGHTAAVH YASEGGEGGE GGDEHVVIAW RAATAVGLPG PLVRLTALDP
DAEYYDVDRQ VRITGAAARA GLRLDLPRGD YASALYHLRR V
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