Gene Caci_2482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2482 
Symbol 
ID8333831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2807750 
End bp2808544 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content70% 
IMG OID644955635 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003113241 
Protein GI256391677 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.32419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTAG AGGCCGGGAA GGCGACCGCG GCGGACGGAA CCGCAATCGC GTACCAGAGC 
GCCGGCAGCG GAACGCCGCT GGTGCTGCTC GCCGGACAGT CCAACACCCA CCGCTGGTGG
GACTCGGCGC GCGCCGCCTT CCAGGACGCG GGCCACCGCA CCATCACGCT GGACTGGCGT
GGCACCGGAG GTAGTGACAA GCCCGACGAG CCTTACAGCA CCAGGGATTT CGCGACGGAC
GTCGTGGCGG TGCTCGACGA TCTGGGCATC GCGCGGGCGC GGGTCTACGG CACGTCGATG
GGTGGCCGGG TCGCGCAGTG GCTGGCCGCC GACTTCCCGG AGCGGGTCGG GGCACTCGTG
CTGGGCTGCA CGTCGCCGGG CGGCGCGCAC GCGGTCGAGC GGGACCGCTC GGTGCGGCAG
GCGCTGGCGA GCTCTGATCG CGTTGCGGCG GACCGGTATC TGCTGGAGCT GATGTACACG
CCGGATTGGC TGGCATCGCA TCAGGGCCCT TATTACGTGG TCGGCGATCC GGAGATGCCC
GCCTACGCGA AGGGGCGTCA CCTGACGGCG AGCGGCAAGC ACGACGCCTG GGACGTGCTG
CCGACGATCG CCGCGCCGAC CTTGGTGGTG CACGGCACCG ACGACGTGTT CAACCCGACA
GCCAACGCAC CGCTGATCAC CGAACGGATT CCGGACGCGC GGATGGTGCT GATCGAGGGT
GCTCGGCACG CGTACTTCGA CGAGTTCCGC GACGTCGCCG GTCCGGTGGT GCTGGACTTC
CTCGCCGAGC ACTGA
 
Protein sequence
MTLEAGKATA ADGTAIAYQS AGSGTPLVLL AGQSNTHRWW DSARAAFQDA GHRTITLDWR 
GTGGSDKPDE PYSTRDFATD VVAVLDDLGI ARARVYGTSM GGRVAQWLAA DFPERVGALV
LGCTSPGGAH AVERDRSVRQ ALASSDRVAA DRYLLELMYT PDWLASHQGP YYVVGDPEMP
AYAKGRHLTA SGKHDAWDVL PTIAAPTLVV HGTDDVFNPT ANAPLITERI PDARMVLIEG
ARHAYFDEFR DVAGPVVLDF LAEH