| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2480 |
|---|
| Symbol | |
|---|
| ID | 8333829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2804251 |
|---|
| End bp | 2805087 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644955633 |
|---|
| Product | protein of unknown function DUF574 |
|---|
| Protein accession | YP_003113239 |
|---|
| Protein GI | 256391675 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA GCAGACCGGA ATGGGCCCCG GCCGCCATCG ACCTGGACCA GCCCAGCTCC
GCGCGGGTCT GGGACTACTT CCTCGGCGGG TCGCACAACT TCGAGGTGGA CCGGCGTGTC
GCCGAACAGG CCATCGCCTT CAAGCCCGAC ATGCCCGACC TGGCCCGCCA GGTGCGCATG
TTCCTGCAGC GCGCCGTCCG CACCGCCGCC GCTGCCGGCA TCGACCAGTA CATCGACATC
GGCGCCGGCG TCCCGACCAT GGGACCGGTC CACGAGATCG CGCGCGAGAC CGTCCCGCAC
GCGCGCGTCG TCTACGTCGA CCACGACCCG GTGGCGGTCG CCCACGGCCA GGCCCTGCTC
GCCGACGACC CCGACGCGGT CTTCATCCAG GCCGACGCCC GCTCCCCGCG GGCCATCCTG
GACCACCCCG AGGTCCACGC CCTGATCGAC CTCGACCGCC CGGTCGCCGT CGTCCTGTGC
TCCCTGCTGC ACTTCGTCTC CGCGGACGAC GATCCCGCCG CCCTGGTGGC GACCCTGCGC
GCGGCGATGG CACCGGGCAG CCACCTGATC GTCCAGCACG CCTCCCACGA CGGCCAGTCC
GGCGACATCA TCAAGATGCT CCAGATGTGG AACGCCAACT CCCCGGAACC GATGTACTGG
CGCACCCACG ACGAGATCGA GAACCTCCTC GCCGGCTTCA CCATCCTCGA TCCCGGCGTG
GTCCCCCTGC CCCTGTGGCG CCCCGAAGCC GAAGACCGCG CCGGCGCGGC CGAGAATCCG
GAACGCTACG CCTCCTATGC CGCCGTGGGC ACCAAGCCCG GGGCAACGGC CGACTGA
|
|---|
| Protein sequence | MTDSRPEWAP AAIDLDQPSS ARVWDYFLGG SHNFEVDRRV AEQAIAFKPD MPDLARQVRM
FLQRAVRTAA AAGIDQYIDI GAGVPTMGPV HEIARETVPH ARVVYVDHDP VAVAHGQALL
ADDPDAVFIQ ADARSPRAIL DHPEVHALID LDRPVAVVLC SLLHFVSADD DPAALVATLR
AAMAPGSHLI VQHASHDGQS GDIIKMLQMW NANSPEPMYW RTHDEIENLL AGFTILDPGV
VPLPLWRPEA EDRAGAAENP ERYASYAAVG TKPGATAD
|
|---|
| |