Gene Caci_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2446 
Symbol 
ID8333795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2767295 
End bp2767792 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content71% 
IMG OID644955599 
ProductRoadblock/LC7 family protein 
Protein accessionYP_003113205 
Protein GI256391641 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.1595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCT CAAATAGTGC CGCCCCTTGG GAGAGCGAAG AACAGCGGCT CGCTGCCGAC 
GCCGCGGACT TCACGTGGAT GGTCGCCCGC TTCGCCACCG AGACGGCCGG CGTCGTCGAC
GCCATCGCGG TCTCCTCCGA CGGGCTGCTG ATCGCCGTCT CGCGCCCTCA GGACCCGGGG
TCCTCCGAGC GGCTGGCCGC GGTGGTGTCC GGGATGACGT CCCTGGCCGC CGGCGCCGGC
GGCAACTACG GCCTGGGCGC GCTGAACAAG GTCATCATCG ACATGGAGGG CGGCTACCTG
CTGATCACCC GGATCGGCAG CGGGGCGGTG CTGGGCGCGG TCACCACGGC CGACGCCAAG
CTCGCCAACG TCGCCTACGA GATGACGCTG TTCGCCAACC GCGTCGGCGC GGTGCTGAGC
CCGGCGCTGA TCATCGAGCT GAAGAACACC GTCGGCATGG GCGTCTCCGC GCGCAGACCG
GGCGGTGGGC AGGGGTGA
 
Protein sequence
MIGSNSAAPW ESEEQRLAAD AADFTWMVAR FATETAGVVD AIAVSSDGLL IAVSRPQDPG 
SSERLAAVVS GMTSLAAGAG GNYGLGALNK VIIDMEGGYL LITRIGSGAV LGAVTTADAK
LANVAYEMTL FANRVGAVLS PALIIELKNT VGMGVSARRP GGGQG