Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2442 |
Symbol | |
ID | 8333791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2758538 |
End bp | 2761393 |
Gene Length | 2856 bp |
Protein Length | 951 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644955595 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_003113201 |
Protein GI | 256391637 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4581] Superfamily II RNA helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.312521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCGC CCGCTGAGCC CCCGCGGGCT CCCGATGTGC CTGCCCTGTC GGAGTTCCAG CGCTTCCGGG GCGGCTACGA CTTCGATCTC GACGGGTTCC AGATCGAGGG CTGCCGCGCG CTGGAGGCCG GGGACAGCGT CCTGGTCGCC GCCCCGACCG GGTCGGGCAA GACCGTCGTG GGGGAGTTCG CCGTCCACCT GGCGCTCGCG CAGGGCGTCA AATGCTTCTA CACCACGCCG ATCAAGGCGC TGTCCAACCA GAAGTACTCC GATCTGGTCG CCCGGCACGG CGCGGCCAAC GTCGGCCTGC TGACCGGCGA CAACACGGTC AACGGCGAGG CGCCGATCGT CGTGATGACG ACCGAGGTGC TGCGCAACAT GCTCTACGCC GGCTCCGGCA CGCTGTCCGG GCTCGGCTAC GTCGTCATGG ACGAGGTCCA CTACCTCGCC GACCGCTTCC GCGGCGCGGT CTGGGAAGAG GTCATCATCC ACCTGCCGGA GTCGGTGCGC CTGGTCGCGC TCTCGGCGAC GGTGTCCAAC GTCGAGGAGT TCGCCGGCTG GCTGCGCACG GTGCGCGGCG ACACCAAGTC GATCGTCTGG GAGCACCGTC CGGTGCCGCT GTGGCAGCAC GTGCTGTCCG GCCGCCGGAT GTTCGACCTG TTCGCCAACG GCGCCGACGG CGAGGCGATG CCCGGCGCCA ACGGTCAGGG CGGGATCTCC GCGGCCCGCG AACTGCGGGT CAACCCCGAG CTGGTGCGGT TGAACCGCGA GAGCTCGGAA TCCATGTACA AGCGGGGCGG GCCTCGCGGC GGTGGCGGCG GCGGTGGCAA CCGGGGTCAG CGCGGCCGGG TCCAGCGGCG CGGCCGCGGC GGCTGGGTCC CCAGCCGCGT CGACGTGATC GAGAAGCTCG ACACCGAGGG CCTGCTTCCC GCCATCACCT TCATCTTCAG CCGGGCCGGC TGCGACGCGG CGGTCCAGCA GTTCCTGCAC GGCGGTGTCA GGCTGCTGAA CGCCGACGAG CGGGCCCGGG TCAAGGCGCA CGTGCTGGAG CGCACCGGGC GGATCCCGTC GGAGGATCTC AACGTCCTGG GCTTCCACGA CTGGTTCGAC GGTCTGCAGC GCGGCGTGGC GGCCCACCAC GCGGGCATGC TGCCGACGTT CAAGGAGATC GTCGAAGAGC TCTTCGTCCA AGGTCTGGTC AAGGCGGTGT TCGCCACCGA GACGCTGGCG CTGGGCATCA ACATGCCGGC GCGCACCGTG GTGATGGAGG CGCTGACCAA GTGGAACGGT GAGAACCACG TCGACCTGAC CGCCGGGGAG TACACCCAGC TCACCGGGCG CGCGGGCCGG CGCGGGATCG ACATCGAGGG CCACGCGGTG GTGCTGTGGC GCGCCGACCT GGACGCCAAG GCGCTGGCCG GGCTGGCCGG CACGCGGACG TACCCGCTGC GCTCGTCGTT CAAGCCGTCC TACAACATGG CGGTCAACCT GGTCGGGCAG TTCGGCGCCG AGCGTGCGCG CAACCTGCTG GAGACCTCCT TCGCGCAGTA CCAGGCCGAC CAGGCGGTCG TCGGGCTGAC CCGCCAGGTG CGCAAGAACA CTGACGCGCT GGACGGCTAC TCCGAGGCCA TAACCTGCCA CCTCGGCGAC TTCGACGAGT ACATGACGCT GCGGCGCCAG CTCTCCGAGC GCGAGGCCGA CCTGTCGCGG CAGGGCGCTG CGAACCGCCG TGCCGCCGCG CTGGAGTCGC TGGAGAGGCT CCAGCCCGGC GACATCATCG TGGTGCCCGC GGGCAAGCGC GCCGGCGTGG CCGTGGTCCT GGACCCGGGG ATACCGGCCT CGACCGCCGG CCGCCCGAAG CAGCTCACCG GCGACGGCCC GCGCCCGGTG GTCCTCACCG TCGACCGCCA GGTCGTCCGC CTGTCGCTGA CGGACTTCCC CAGCCCGGCC GAACCGCTGG ACCACATGCG CGTCCCCAAG TCCTTCAACG CCAAGTCGCC CCAGTCCCGC CGCGACCTGG CCACCGCCCT GCGCAACAAG GCAGGCGACA AGGAGATCCC GCCCTACCGC AAGACCCGCT ACCGCTCCGA GGCGACCGAC GACACGGAGA TCAGCCGCCT GCGCAAGGCC ATCCGAGCCC ACCCCTGCCA CGGCTGCCAG GACCGCGAGG ACCACGCCCG CTGGGCCGAG CGCTTCCACA AGCTCGACCG CGAGACCAAG CAGCTCCAAA AGCGCGTCGC AGGCCGCACC AACAGCATCG CCCGCGTCTT CGACCGAGTC TGCGGCCTCC TGGAACAACT CGGCTACCTC GACGGTGACC AGGTCACCCC GATCGGCAAG CGCCTCGGCA GGCTCTACAC CGAACTGGAC CTCCTGACCG CCGAAACCCT CCGCGCGGGC CTGTGGGAAG GCCTGACCCC GCCCGAACTC GCCGCCTGCG TCTCAGCCCT GGTCTACGAA GCCCGCCGAG CCGACGACGC GGGCCCACCC CGCCTCCCCG GCGGCGCCGT CCCCAAGACC CTCGACGAAA TGGTCCGCCT CTGGGCCAAA CTCGAGGACC TGGAAACCGA CCACCACCTC GAGTTCCAAC GCGAACCCGA CCTCGGCTTC GCCCTCCCGG CCTTCCACTG GGCCTCCGGC AAAGCCCTGG AAGAAGTCCT GTGGGACGTA GAAATGCCCG CAGGCGACTT CGTCCGCTGG TGCAAGCAAC TCATCGACCT CCTCGGCCAA GTAGCCAACG CCGCCGCCGA ACTGAAAGCC ACCGACGGCA AGAAGAGCAC CGTCCGCGAA GCCGCCCAGG AGGCCATCGA CGGCCTGCGG CGCGGCGTGG TCGCCTACTC GATGATGAAC GGGTGA
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Protein sequence | MSSPAEPPRA PDVPALSEFQ RFRGGYDFDL DGFQIEGCRA LEAGDSVLVA APTGSGKTVV GEFAVHLALA QGVKCFYTTP IKALSNQKYS DLVARHGAAN VGLLTGDNTV NGEAPIVVMT TEVLRNMLYA GSGTLSGLGY VVMDEVHYLA DRFRGAVWEE VIIHLPESVR LVALSATVSN VEEFAGWLRT VRGDTKSIVW EHRPVPLWQH VLSGRRMFDL FANGADGEAM PGANGQGGIS AARELRVNPE LVRLNRESSE SMYKRGGPRG GGGGGGNRGQ RGRVQRRGRG GWVPSRVDVI EKLDTEGLLP AITFIFSRAG CDAAVQQFLH GGVRLLNADE RARVKAHVLE RTGRIPSEDL NVLGFHDWFD GLQRGVAAHH AGMLPTFKEI VEELFVQGLV KAVFATETLA LGINMPARTV VMEALTKWNG ENHVDLTAGE YTQLTGRAGR RGIDIEGHAV VLWRADLDAK ALAGLAGTRT YPLRSSFKPS YNMAVNLVGQ FGAERARNLL ETSFAQYQAD QAVVGLTRQV RKNTDALDGY SEAITCHLGD FDEYMTLRRQ LSEREADLSR QGAANRRAAA LESLERLQPG DIIVVPAGKR AGVAVVLDPG IPASTAGRPK QLTGDGPRPV VLTVDRQVVR LSLTDFPSPA EPLDHMRVPK SFNAKSPQSR RDLATALRNK AGDKEIPPYR KTRYRSEATD DTEISRLRKA IRAHPCHGCQ DREDHARWAE RFHKLDRETK QLQKRVAGRT NSIARVFDRV CGLLEQLGYL DGDQVTPIGK RLGRLYTELD LLTAETLRAG LWEGLTPPEL AACVSALVYE ARRADDAGPP RLPGGAVPKT LDEMVRLWAK LEDLETDHHL EFQREPDLGF ALPAFHWASG KALEEVLWDV EMPAGDFVRW CKQLIDLLGQ VANAAAELKA TDGKKSTVRE AAQEAIDGLR RGVVAYSMMN G
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