| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2407 |
|---|
| Symbol | |
|---|
| ID | 8333756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2726575 |
|---|
| End bp | 2727420 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644955560 |
|---|
| Product | orotidine 5'-phosphate decarboxylase |
|---|
| Protein accession | YP_003113166 |
|---|
| Protein GI | 256391602 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCTC GACCGGAGAA GACTTTCGGC GCACGGTTGC GGACTGCTCT CGACGAGCGG
GGACCGCTGT GCGCCGGGAT CGACCCGCAC GCGGCGCTGC TGGCGCAGTG GGACCTCGAC
GACGACGTCG CCGGGCTGGA GCGGTTCGCG TACACCGTGG TCGAGGCGCT GGCCGACCGG
GTCGCCGCGC TCAAGCCGCA GTCGGCGTTC TTCGAGCGCT ACGGGAGCCG GGGGATCGCG
GTCCTGGAGC GGGTCGTCGA CGACGCCCGC TCGGCCGGCG CCGTCGTGAT CATGGACGCC
AAGCGGGGGG ACATCGGGTC CACGGTCGCG GCCTACGCCG ATGCCTACGT GGCGCCGTCC
TCGCCGCTGT TCTCCGACGC CCTGACCGCG AGCCCGTACC TCGGCTTCGG GTCGCTGGAG
CCGCTGTACG CGATGGCGGA GAAGAACCAC GCCGGGGTGT TCGTGCTCGG ACTGACCTCG
AACCCTGAGG GCTCGCAGGT GCAGGGCGCG ATCGGCGCCT CGGGGCGGTG CGTCGCGGAG
GAGATCGTCA CCGCCGCGGC CGCCCGCAAC GCCGGCGCCT CGCCGATGGG AGCGATCGGC
GCGGTCGTCG GCGGGACCGT CGAGACGCCG GGCTTCGACC TGGCGCAGCT CAACGGCGCG
TTCCTGGTCC CCGGGATCGG GGCGCAGGGC GCGACCGCCG CGGACGTGAA GCGGATCTTC
GGCGCCGGGA CGCGGAACGT GGTGCCCTCC AGCAGCCGGG AGATCCTGCG CGGCGGGCCC
TCGGTGGCCG GGCTGCGCGA TGCGGCGGCG CGGACCGTCG AGGAACTGCG GGGGATTCTG
GACTAG
|
|---|
| Protein sequence | MAARPEKTFG ARLRTALDER GPLCAGIDPH AALLAQWDLD DDVAGLERFA YTVVEALADR
VAALKPQSAF FERYGSRGIA VLERVVDDAR SAGAVVIMDA KRGDIGSTVA AYADAYVAPS
SPLFSDALTA SPYLGFGSLE PLYAMAEKNH AGVFVLGLTS NPEGSQVQGA IGASGRCVAE
EIVTAAAARN AGASPMGAIG AVVGGTVETP GFDLAQLNGA FLVPGIGAQG ATAADVKRIF
GAGTRNVVPS SSREILRGGP SVAGLRDAAA RTVEELRGIL D
|
|---|
| |