Gene Caci_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2394 
Symbol 
ID8333743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2712958 
End bp2713395 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content70% 
IMG OID644955547 
ProductNusB antitermination factor 
Protein accessionYP_003113153 
Protein GI256391589 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCTC CGCGCAGCAA GGCCCGGCAG CGGGCCCTGG AGATCCTCTT CGAGGCGGAT 
CTGCGGGGCG TCGATCCGCG CACGGTCCTG GCCGACACCC AGGCACGGAT CCGTGCCCAG
GGACCCGAGG GCACGATCCC GCAGGTGCAG CCGTACGCGG CGACCCTGGT CGAGGGCGTG
CTGGAGCACG TGGACAAGAT CGACGACCTG CTCGACGAGC ACAGCGAGGG CTGGGCTCTG
GACCGCATGC CGACCGTGGA CCGCAACGTC CTGCGGATCG GCGTGTACGA GCTGCTCTGG
CAGTCCGACG TGCCCGACGC GGTGGTCCTG GACGAGGCGG TCTCGCTGGC GCGGCTGATG
TCGACCGACG AGTCGCCGCA GTTCGTCAAC GGGCTGCTCG CGCGGATAGC CGAGGTCAAG
GACAGCTTGA AGCGGTAG
 
Protein sequence
MASPRSKARQ RALEILFEAD LRGVDPRTVL ADTQARIRAQ GPEGTIPQVQ PYAATLVEGV 
LEHVDKIDDL LDEHSEGWAL DRMPTVDRNV LRIGVYELLW QSDVPDAVVL DEAVSLARLM
STDESPQFVN GLLARIAEVK DSLKR