Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2394 |
Symbol | |
ID | 8333743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2712958 |
End bp | 2713395 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644955547 |
Product | NusB antitermination factor |
Protein accession | YP_003113153 |
Protein GI | 256391589 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCTC CGCGCAGCAA GGCCCGGCAG CGGGCCCTGG AGATCCTCTT CGAGGCGGAT CTGCGGGGCG TCGATCCGCG CACGGTCCTG GCCGACACCC AGGCACGGAT CCGTGCCCAG GGACCCGAGG GCACGATCCC GCAGGTGCAG CCGTACGCGG CGACCCTGGT CGAGGGCGTG CTGGAGCACG TGGACAAGAT CGACGACCTG CTCGACGAGC ACAGCGAGGG CTGGGCTCTG GACCGCATGC CGACCGTGGA CCGCAACGTC CTGCGGATCG GCGTGTACGA GCTGCTCTGG CAGTCCGACG TGCCCGACGC GGTGGTCCTG GACGAGGCGG TCTCGCTGGC GCGGCTGATG TCGACCGACG AGTCGCCGCA GTTCGTCAAC GGGCTGCTCG CGCGGATAGC CGAGGTCAAG GACAGCTTGA AGCGGTAG
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Protein sequence | MASPRSKARQ RALEILFEAD LRGVDPRTVL ADTQARIRAQ GPEGTIPQVQ PYAATLVEGV LEHVDKIDDL LDEHSEGWAL DRMPTVDRNV LRIGVYELLW QSDVPDAVVL DEAVSLARLM STDESPQFVN GLLARIAEVK DSLKR
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