Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2325 |
Symbol | |
ID | 8333674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2633167 |
End bp | 2633976 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644955478 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_003113084 |
Protein GI | 256391520 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGAGAAC TGATCGAAGT CACCGACCCG TCCGATCCGC GGCTGCACGA CTACTCCGGC CTCACCGACG TCGAGCTGCG CAAGGTCCGC GAACCCGCCG AGGGCTTGTT CCTGGCCGAG GGCGAGAAGG TGATCCGCCG CGCGCTGGCC GCCGGCTATC CGATGCGCTC GACGCTGCTC TCGCCCAAGT GGGCCCAGGC GATGCGGCCA TTGATCGAGG AGGTGGACGC GCCGGTCTAC GTCGGCAGCG AGGCGTTGCT GGAGGCGGTG ACCGGCTTCC ACGTCCACCG CGGCGCCCTG GCCTCGATGC AGCGCACGCC GGTCTCGGAG GCCGGCGCCG TGCTGGCGGC GGCGAAGCGG GTCGTGGTGA TGGAGGACAT CGTCAACCAC ACCAACCTCG GCGCGATCTT CCGCAGCGCG GCGGCGCTGG GGATGGACGC CGCCGTCCTG ACGCCGAGCT GCGCGGACCC GCTCTACCGG CGCTCGGTCC GGGTGTCGAT GGGGACGGTC TTCGCGCTGC CGTACGCGCG GCTGGACTCC TGGCCCGGCG GTCTGACCAC GTTGGCCGAG CACGGATTCC GGACGATCGC GCTGACGCCC GGTCCGACCG CGATCGATCT CCGAGACCTA CGATTCGGGC CGGAGGACAA GGTGGCGCTG CTTCTGGGGA CGGAGGGCGA CGGGCTGTCG GATCCGGCTC TGGCGGCTGC GGATATGCGG GTACGAATTC CCATGACGGC CGGGGTGGAT TCGCTGAACG TGGCAGCCGC GGCGGCGGTG GCGTGTTATG CGATCGCCGC TTCTGGCTGA
|
Protein sequence | MGELIEVTDP SDPRLHDYSG LTDVELRKVR EPAEGLFLAE GEKVIRRALA AGYPMRSTLL SPKWAQAMRP LIEEVDAPVY VGSEALLEAV TGFHVHRGAL ASMQRTPVSE AGAVLAAAKR VVVMEDIVNH TNLGAIFRSA AALGMDAAVL TPSCADPLYR RSVRVSMGTV FALPYARLDS WPGGLTTLAE HGFRTIALTP GPTAIDLRDL RFGPEDKVAL LLGTEGDGLS DPALAAADMR VRIPMTAGVD SLNVAAAAAV ACYAIAASG
|
| |