Gene Caci_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2325 
Symbol 
ID8333674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2633167 
End bp2633976 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content71% 
IMG OID644955478 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_003113084 
Protein GI256391520 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAGAAC TGATCGAAGT CACCGACCCG TCCGATCCGC GGCTGCACGA CTACTCCGGC 
CTCACCGACG TCGAGCTGCG CAAGGTCCGC GAACCCGCCG AGGGCTTGTT CCTGGCCGAG
GGCGAGAAGG TGATCCGCCG CGCGCTGGCC GCCGGCTATC CGATGCGCTC GACGCTGCTC
TCGCCCAAGT GGGCCCAGGC GATGCGGCCA TTGATCGAGG AGGTGGACGC GCCGGTCTAC
GTCGGCAGCG AGGCGTTGCT GGAGGCGGTG ACCGGCTTCC ACGTCCACCG CGGCGCCCTG
GCCTCGATGC AGCGCACGCC GGTCTCGGAG GCCGGCGCCG TGCTGGCGGC GGCGAAGCGG
GTCGTGGTGA TGGAGGACAT CGTCAACCAC ACCAACCTCG GCGCGATCTT CCGCAGCGCG
GCGGCGCTGG GGATGGACGC CGCCGTCCTG ACGCCGAGCT GCGCGGACCC GCTCTACCGG
CGCTCGGTCC GGGTGTCGAT GGGGACGGTC TTCGCGCTGC CGTACGCGCG GCTGGACTCC
TGGCCCGGCG GTCTGACCAC GTTGGCCGAG CACGGATTCC GGACGATCGC GCTGACGCCC
GGTCCGACCG CGATCGATCT CCGAGACCTA CGATTCGGGC CGGAGGACAA GGTGGCGCTG
CTTCTGGGGA CGGAGGGCGA CGGGCTGTCG GATCCGGCTC TGGCGGCTGC GGATATGCGG
GTACGAATTC CCATGACGGC CGGGGTGGAT TCGCTGAACG TGGCAGCCGC GGCGGCGGTG
GCGTGTTATG CGATCGCCGC TTCTGGCTGA
 
Protein sequence
MGELIEVTDP SDPRLHDYSG LTDVELRKVR EPAEGLFLAE GEKVIRRALA AGYPMRSTLL 
SPKWAQAMRP LIEEVDAPVY VGSEALLEAV TGFHVHRGAL ASMQRTPVSE AGAVLAAAKR
VVVMEDIVNH TNLGAIFRSA AALGMDAAVL TPSCADPLYR RSVRVSMGTV FALPYARLDS
WPGGLTTLAE HGFRTIALTP GPTAIDLRDL RFGPEDKVAL LLGTEGDGLS DPALAAADMR
VRIPMTAGVD SLNVAAAAAV ACYAIAASG