Gene Caci_2321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2321 
Symbol 
ID8333670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2629449 
End bp2630666 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content77% 
IMG OID644955474 
Producturoporphyrin-III C-methyltransferase 
Protein accessionYP_003113080 
Protein GI256391516 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase 
TIGRFAM ID[TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA TGACCGACCC CGCCCCCGTC TATCCCGCCG CGCTGCGGCT GGCCGGCCGG 
CGGGTGGTGG TGATCGGCGG CGGCCCGGTG GCCCAGCGCC GCGTGCTGGG CCTGCTGGAC
GCCCGCGCCG ACGTGCTGGT CGTCGCCCCC GAGGCGACGC CGGCGATCGA GGCGCTGGCC
GACGGCGGCG AGATCGTCTG GGAGCCGCGG CCGTACCGCG ACGGCGACCT GGCCCAGGCC
TGGTACGCCG TGGCCGCCGC CGACGACCCG GCGGTGAACG GCGCGGTGGC GCGCGAGGCC
GAGGCCGGGC GGGTGTTCTG CTCCCGCGCC GACTCCGCCG AGGACTCCAC GGCGTGGACC
CCGGCCGTCG GGCGCCACGA CGGCGTCACG GTCGCGGTGA TCGGCGGCGG CGACCCGCGC
CGCGCCGTGG ACGTCCGCGA CGGCGTCCTG GAAGGGCTTC GCGACGGAAC CCTGGCCGCC
CCTCACCACC GCGGCCGGAC CCCCGGCGTG GCGCTGGTCG GCGGCGGACC CGGCGACCCG
GACCTGATCA CCGTGCGCGG CCGCCGGCTG CTGGCCGAGG CCGACGTGGT GGTCGCCGAC
CGGCTCGGCC CGCGCGGGCT GCTGGACGAG CTGGCGCCGG ACGTGGAGAT CGTCGACGCC
TCGAAGATCC CCTACGGCCG CTCGCTGGCC CAGGAGGCGA TCAACGAGCT GCTGATCGAG
CGCGCGAAGG CCGGCAAGTT CGTGGTCCGG CTCAAGGGCG GCGACCCGTT CGTCTTCGGC
CGCGGCTTCG AGGAGGTGCT GGCCTGCGCC GAGGCCGGCG TGCCGTGCTC GGTGGTCCCG
GGCATCACCA GCTCGATCTC GGTGCCGGCG CTGGCCGGCA TCCCGGTCAC GCACCGCGGC
GTGGCGCACG AGTTCACCGT GGTCTCCGGC CACGTCGCCC CGGACAACCC CAAGTCCCTG
GTGGACTGGG CCGCCCTGGG CCGGATGACC GGCACGCTGG TGATCCTGAT GGGCATCGAG
CGCATAGCCG CGATCGCCGA GACGCTGCTG GCCCACGGCC GCGGCCCCGA GACCCCGGTC
GCGGTGATCC AGGAGGGCAC GATGCCCGGC GAGCGCCGGG TGCAGACCAC GCTGGGCATG
ATCGGCGAGG CGGTGGCCGA GGCCGGGATC CGTCCGCCGG CGATCGTGGT GGTCGGACCG
GTCGTCGGGC TCGTCTGA
 
Protein sequence
MSAMTDPAPV YPAALRLAGR RVVVIGGGPV AQRRVLGLLD ARADVLVVAP EATPAIEALA 
DGGEIVWEPR PYRDGDLAQA WYAVAAADDP AVNGAVAREA EAGRVFCSRA DSAEDSTAWT
PAVGRHDGVT VAVIGGGDPR RAVDVRDGVL EGLRDGTLAA PHHRGRTPGV ALVGGGPGDP
DLITVRGRRL LAEADVVVAD RLGPRGLLDE LAPDVEIVDA SKIPYGRSLA QEAINELLIE
RAKAGKFVVR LKGGDPFVFG RGFEEVLACA EAGVPCSVVP GITSSISVPA LAGIPVTHRG
VAHEFTVVSG HVAPDNPKSL VDWAALGRMT GTLVILMGIE RIAAIAETLL AHGRGPETPV
AVIQEGTMPG ERRVQTTLGM IGEAVAEAGI RPPAIVVVGP VVGLV