Gene Caci_2315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2315 
Symbol 
ID8333664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2619035 
End bp2620072 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content70% 
IMG OID644955468 
Productband 7 protein 
Protein accessionYP_003113074 
Protein GI256391510 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCA CGATCGTCGT CCTCATCTTG ATCGCCGCCG CGATCGCGGT GAGCTTGTTC 
CAGTCCGTGC GGATCGTCGG GCAGGGGACC GTCGCCGTCA TCGAGCGCTT CGGCCGCTAC
ACCCGGACCC TGACGCCGGG CCTGCGGATC CTGATGCCGG TGGTGGACCG CGTGCGCGCG
ATCATCGACG TGCGCGAGCA GGTCGTGCCG TTCCCGCCGC AGCCGGTGAT CACCCAGGAC
AACCTGACGG TCTCCATCGA CACCGTCATC TACTTCCAGG TCACCGACGC CCGCGCGGCG
GTGTACCAGA TCACCAACTA CATCCAGGCG ATCGAGCAGC TGACGGTCAC CACGCTGCGC
AACATCGTCG GCGGCATGGA CCTGGAGCGC ACCCTCACCA GCCGCGACTA CATCAACAAC
GAGCTGCGCG GGGTCCTGGA CCAGGTGACC GGCAACTGGG GCATCCGGGT CTCCCGGGTC
GAGCTGAAGG CGGTCGAGCC GCCGGCCTCG ATCCAGGACT CGATGGAGAA GCAGATGCGC
GCCGACCGGG ACCGCCGCGC GGCGATCCTG TCGGCCGAGG GCTTCAAGCA GTCGCAGATC
CTCACCGCCG AGGGCGAGAA GCAGGCGGCG GTCCTGCGCG CCGAGGGCGA GGCCAAGGCG
CGCGCGCTGC AGGCCGAGGG CGAGGCGGCG GCGATCCGCA AGGTCTTCGA GGCCATCCAC
GAGGGCAACG CCGACAACCA AGTGATGGCC TACCAGTACC TGCAGCAGCT GCCGAAGATC
GCCGAGGGCG ACAGCAACAA GCTCTGGATC ATCCCTAGCG AGTTCGGCAA GGCGCTGGAG
AACGTCGGCG GGGCGCTGGG CCGCTTCGGC ATGCCGGGGC CGCCGTCCGT GGAGCCGGTG
GCCGCGAACG GCAACTCCCT GGGCTCGGGC GACGCGCAGA GCGGCGGGAA GGCACAGGCG
CCGCGCGCCG ACCGTCCGCC GCGCCAGCGC GGGACGAGCC CGGCGGACGA TGTCTTCTTC
AACCAGGACG AGGACTGA
 
Protein sequence
MIATIVVLIL IAAAIAVSLF QSVRIVGQGT VAVIERFGRY TRTLTPGLRI LMPVVDRVRA 
IIDVREQVVP FPPQPVITQD NLTVSIDTVI YFQVTDARAA VYQITNYIQA IEQLTVTTLR
NIVGGMDLER TLTSRDYINN ELRGVLDQVT GNWGIRVSRV ELKAVEPPAS IQDSMEKQMR
ADRDRRAAIL SAEGFKQSQI LTAEGEKQAA VLRAEGEAKA RALQAEGEAA AIRKVFEAIH
EGNADNQVMA YQYLQQLPKI AEGDSNKLWI IPSEFGKALE NVGGALGRFG MPGPPSVEPV
AANGNSLGSG DAQSGGKAQA PRADRPPRQR GTSPADDVFF NQDED