Gene Caci_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2290 
Symbol 
ID8333639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2596438 
End bp2597508 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content71% 
IMG OID644955443 
Producthypothetical protein 
Protein accessionYP_003113049 
Protein GI256391485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGGTC CCGAGGGGCT GTCACGGGTC GCGCGGATGC GGCAGCGCGT CCAGGCCCGC 
AAGCGTGCCC GGGCCCGCCG TGCGGCGCTC GCCGCCGGGG TGGCCGGGTT CGCGGTGATC
GCCGGCATGC TCGGGATGGC GCTCAGCACT CCGTCCTCGG CCAAGGCGAT GTCCGTGGAC
GGCGCGCTGG AATCGGCCTC CGTCACGGTG AACCCGTCGA GCAGCCCTTC GAGCAGCCCA
TCGACCTCGG CGTCCACCAC GGCCGCCCCG CCTTCGGCGC TGGCGGCGGC CGTGAGCGGT
TCCGCGTCGC CGGGCAGTGC CAGCCCGGAG CCCACTGCCA CCGCGACGAC TACCGCCGTC
GCCGCGGCTG CCGGTCCCGG CTCCACGGCC GCCACTCCGG CGCGGCCGAC GAGTTCGCCG
ATCGCGAAGC CGTTCGGCGG TACCGCGGTC GCCGGCGTCC TGTACAAAAC GGACTCTGGC
GTCTCCAGCC ACTTCTGCAG CGCCTCGGTC GTGCACAGCG ACGCCGGGAA CCTGGTCATC
ACCGCCGCGC ACTGCGTCTA CAGCGACGGT CCCAAATCGG ACATCGCCTT CGCGCCGGGC
TTCCACAACG GCACGTTGCC CTACGGTTCC TGGGCAGTCA CCAAGGTCGT GGTCTCGCAG
AGCTGGAAGA GCTCCAACAA TCCGGACCAG GACGTGGCGT TCTTGCAGGT CGCGCCGTCC
TCCAGCGGCG CCTCGCTGGA GTCGGTGACC GGTGCGGACA AGATCGCCTT CGGTCAGGGC
TTCGGGATGC CGGTCACGGT CCCGGCCTAC CCGCAGGGCT CGGACACCCC GATCACGTGC
ACGGCGCCGG CGGTGAAGTT CAGCTCGACG CAGACCGAGT GGGACTGCCG CGGGTATCCG
GACGGCACGT CGGGCGCGCC GTTCCTGACC GGCGTGGACT CCAGTGGCGA GAAGGGCACC
GTCATCGGCG TGATAGGCGG ATACCAGCAG GGCGGCGACA CCCCGGACGT GTCCTACAGC
GCCTACTTCG GCTCGGCGAT CCAGGCGCTG TATCAGAGCG CTTCGTCATA G
 
Protein sequence
MEGPEGLSRV ARMRQRVQAR KRARARRAAL AAGVAGFAVI AGMLGMALST PSSAKAMSVD 
GALESASVTV NPSSSPSSSP STSASTTAAP PSALAAAVSG SASPGSASPE PTATATTTAV
AAAAGPGSTA ATPARPTSSP IAKPFGGTAV AGVLYKTDSG VSSHFCSASV VHSDAGNLVI
TAAHCVYSDG PKSDIAFAPG FHNGTLPYGS WAVTKVVVSQ SWKSSNNPDQ DVAFLQVAPS
SSGASLESVT GADKIAFGQG FGMPVTVPAY PQGSDTPITC TAPAVKFSST QTEWDCRGYP
DGTSGAPFLT GVDSSGEKGT VIGVIGGYQQ GGDTPDVSYS AYFGSAIQAL YQSASS