Gene Caci_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2245 
Symbol 
ID8333594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2546999 
End bp2548099 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content70% 
IMG OID644955398 
Producttransaldolase 
Protein accessionYP_003113004 
Protein GI256391440 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00876] transaldolase, mycobacterial type 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000148922 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGAACA AGAACCTGGA CGCGCTGTCC GGCGCCGGTG TGGCGATCTG GCTGGACGAC 
CTGTCCCGCA AGCGCCTGCA GACCGGCGAC CTGGCCGCGC TGCTGGCCGA GAAGAACGTG
GTCGGCGTGA CCACGAACCC GACGATCTTC CAGAAGGCCA TCGTCGGCCA GGATGTCTAC
AACGAGCAGC TCAAGGACCT CGCGCTGCGC GGCGTGACCG TCGAGGAGGC GGTCCGCATG
ATCACCACCG CCGACGTCCG CGAGGCCGCC GACGTGCTGC GCCCGGCCTA CGACGCCTCC
GGCGGCCAGG ACGGCCGGGT CTCCATCGAG GTCGACCCGC GCCTGGCGCA CCACACGGCG
CCGACCGTGG CCGAGGCCAA GCAGCTGTGG TGGCTGGTGG ACCGCGAGAA CGTGTTCATC
AAGATCCCGG CCACCCGCGA GGGCCTGCCG GCGATCACCG AGGTGCTCGC GGCGGGAATC
AGCGTGAACG TGACCCTGAT CTTCTCGCTG GAGCGCTACC GCGCGGTGAT GGACGCCTTC
CTGGCCGGCC TGGAGCAGGC CCACGCCAAC GGCCACGACC TGACCAAGAT CGCCTCGGTC
GCCTCGTTCT TCGTGTCCCG CGTGGACACC GAGATCGACA AGCGGCTGGA CAAGCTCGGC
AAGTCCGAGC TCAAGGGCAA GGCCGGCGTC GCGAACGCCC GCCTGGCCTT CGAGGCCTAC
GAGGAGGTCT TCGCCGGCGA GCGCTGGGCC GCCCTGGAGC AGGCCGGCGG CAAGCCGCAG
CGGCCGCTGT GGGCCTCCAC CGGCGTGAAG GACCCGGCGT ACCCGGACAC CATGTACGTC
GACGACCTGA TCACCCGCGG CGTGGTGAAC ACCATGCCGG AGGCGACCCT GGACGCCGAG
GCCGACCACG GCAAGCCCTC CGAGGACTCG ATCCGCGCCC ACTACGCCGA GGCGCACAAG
GTGCTCGAGG ACCTCGAGGC GGCCGGCGTC TCCTACGACG ACGTGGTCCA GCTGCTCGAG
GACGAGGGCG TGGACAAGTT CGAGGCGTCG TGGAACGAGC TCCTCGAGGC GGTCCAGAGC
GAACTGGACA AGCTCAAGTG A
 
Protein sequence
MTNKNLDALS GAGVAIWLDD LSRKRLQTGD LAALLAEKNV VGVTTNPTIF QKAIVGQDVY 
NEQLKDLALR GVTVEEAVRM ITTADVREAA DVLRPAYDAS GGQDGRVSIE VDPRLAHHTA
PTVAEAKQLW WLVDRENVFI KIPATREGLP AITEVLAAGI SVNVTLIFSL ERYRAVMDAF
LAGLEQAHAN GHDLTKIASV ASFFVSRVDT EIDKRLDKLG KSELKGKAGV ANARLAFEAY
EEVFAGERWA ALEQAGGKPQ RPLWASTGVK DPAYPDTMYV DDLITRGVVN TMPEATLDAE
ADHGKPSEDS IRAHYAEAHK VLEDLEAAGV SYDDVVQLLE DEGVDKFEAS WNELLEAVQS
ELDKLK