Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2203 |
Symbol | |
ID | 8333548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2497590 |
End bp | 2499389 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644955353 |
Product | YibE/F family protein |
Protein accession | YP_003112963 |
Protein GI | 256391399 |
COG category | [S] Function unknown |
COG ID | [COG5438] Predicted multitransmembrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTGA GCAGCCGACG TTCGAGGTCT GCGCAGGACC GTGCCGACCG GGGCGGGTCC GGTCACGGAC AGTCCCACGG GCACTCGCAC GGGCACGGTC CGGCCGCGCC GGCCTCGCGC CGGCTGCGGA CCCTGATCAC CGCGCTGTTG CTGCCGGTGG CCGCGGCGGC GGTGGCCGGG CTGGTGCTGC TGTGGCCGGC GGCGTCGAAG TCCCCGATCC CGCCGCAGGT GTGGGTGCAG GGGACGGTGA CGGCCTCGGC GCTGGTGCAG CCTGGTGCCG ACGGCGGCAC GGCGCCGGCG GGCGGCACCA CGGCGCCCGG CGGGCAGGAC GCCACCAACG ACAAGCTCAC CATCCACATC ACCAACGGGC CCACCAAGGG CTCGACCGCC ACGGTGACCG TGGGGGTGGA CCCGACCACG CCGAAGTACT CGGTCGGTGA CGATCTGGTC CTCACTTACG ACAAGAGCCA GCCGGCGGAC GGCCAGTACG ACATCAAGGA CTTCCAGCGC GGTCCGCCGC TGATGAGCCT GGGGATCGCG TTCGCGCTGT TCGTCCTGGT GATCGGGCGC TGGCGTGGTG CCGGGGCGAT CGCGGCGCTG GCGGTGTCGT TCGCGGTGCT CGTGAAGTTC ACGCTGCCGG CGATTGTCGG CGGGGAGAAC TCCATCGAGG TGGCGGCGGT CACCGCGGGC ATCATCCTGT TCGCGGCGCT GTATGCGACG CACGGGGTGT CCGTGCGGAC ATCGGTGGCC GTGCTCGGGA CGGCGCTGAG TCTGGGCCTG ATCGGTGTCC TCGGAGAAGC GGGTACCAAG CTGGCCCACC TGACCGGGCT CGGCGACGAC AACGCCGCGA CCGTCGCGGG CTACTTCCAC AAGGTCGACG TCCAGGGTCT GCTGCTGGCG GGCATCATCA TCGGCGCCCT CGGTGTGCTC AACGACGTCA CCGCGACGCA GGTGTCCTCG GTCTGGGAGC TGAAGGCCGC GGATCCGAGT ATGGGAGCCG GCGAGTTGTT CCGCGTCGGT ATGCGGATCG GCCGGGACCA TATCGGCTCG ACCGTCAACA CTCTGGTGTT GGCGTATGCG GGCGGCAGCT TGCCGTTGTT CGTCCTAATG ACCACTTCCA GCCAGGGCTG GAGCGGTGCG GCCGGCGCCG AGGTGGTGGC CGAGGAGATC GTGCGCACGC TGGTGGGCTC GATCGGCTTG GCCGCGGCGG TGCCGATCAC CACGGCGCTG GCCGCGTACT TCGCCTCCGG CGAGGGTCAC GGCGCGGAGT CGCAGAGCTC CCGCCTGGAG TACACAGACC TGCGCGAAGG TCGTGGAGCG CGCGGCGGCC GCCGCAGCGT CATCGACGAC CTCAACGACG AGGACGCGCT GACCCAGGAC ACTGTCGTGG GGACGCGCCC GGCGCGCCCG GCCGGCAGTG CAGGCGGCAG TGCAGTCGGC GGTGCAGTCG GCGGTGCCGC TGGGCGGCCG GCGCCGGTCC CGCGCATGCC GGAGAGTCGT CGGAGCGGTG AGTGGAATTC GGATGGCACG CGGGTGGGGA GTGGTAGCGG TCCGCACCGG ATGCCGCGTC CGGCGCCGTT CCCGGCGCCC GCGCCGCAGC CGCAGCCGCA GCCACAGCCA CAGCCACAGC CACAAGCTCA GCCTCAGCCG CAGCCGGCGG TCGATCCCTA TGGGAAGCCT TATAGGACGA CCGATCCGTA TGGCGCCGAT CCGTATGAGT CCGACCCGTA TGCCACCAAT CCATATGGAT CCGATCCGTA TGGCGGGCAG CAACAGGACC CGCCGCCGTA CTACGGGTAA
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Protein sequence | MAVSSRRSRS AQDRADRGGS GHGQSHGHSH GHGPAAPASR RLRTLITALL LPVAAAAVAG LVLLWPAASK SPIPPQVWVQ GTVTASALVQ PGADGGTAPA GGTTAPGGQD ATNDKLTIHI TNGPTKGSTA TVTVGVDPTT PKYSVGDDLV LTYDKSQPAD GQYDIKDFQR GPPLMSLGIA FALFVLVIGR WRGAGAIAAL AVSFAVLVKF TLPAIVGGEN SIEVAAVTAG IILFAALYAT HGVSVRTSVA VLGTALSLGL IGVLGEAGTK LAHLTGLGDD NAATVAGYFH KVDVQGLLLA GIIIGALGVL NDVTATQVSS VWELKAADPS MGAGELFRVG MRIGRDHIGS TVNTLVLAYA GGSLPLFVLM TTSSQGWSGA AGAEVVAEEI VRTLVGSIGL AAAVPITTAL AAYFASGEGH GAESQSSRLE YTDLREGRGA RGGRRSVIDD LNDEDALTQD TVVGTRPARP AGSAGGSAVG GAVGGAAGRP APVPRMPESR RSGEWNSDGT RVGSGSGPHR MPRPAPFPAP APQPQPQPQP QPQPQAQPQP QPAVDPYGKP YRTTDPYGAD PYESDPYATN PYGSDPYGGQ QQDPPPYYG
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