Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2135 |
Symbol | |
ID | 8333480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2420676 |
End bp | 2421674 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644955285 |
Product | Ribosomal small subunit Rsm22 |
Protein accession | YP_003112895 |
Protein GI | 256391331 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG5459] Predicted rRNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.3641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTCC CCACCGACCT CGCCGCGGCG CTCGACGCCG CCACCGCCGA CCTGCCGTTG CGTGAGCTGG AATCGTCGGT CGACCGCCTG ATCGCGCGGT ACCGGACCCC GGGGCGTGCC GATCGCCCGA TCCTCAGCGG TCACATCGAC GCCGCGGCTT ATGCGGCGTA CCGGATGCCG GCGACGTGGG GTGCGGTGCG CGCCGCGCTC GCCGCTACCG CGGAGCGGCG GCCGGGCTGG GCGCCGCAGA GTCTGGTGGA CGTCGGCGGC GGGACCGGGG CGGCGGCGTG GGCCGCGGCG ACGGTGTTCG GCGATTCGCT GAAGGAGGTC ACTGTTCTCG ACCAGGTGAC CGAGGCGCTG GAGTTGGGGC GAGGGCTCGC GCGTAATGCT TTCTCGGGCG CACTGCGGCA TGCGGAGTGG CGGAAGGTGC GCTTCCCGGC GGAGGTTCCC GGGGCGGATC TGGTGACTGT CTCCTACGTC CTCAGCGAGC TGGCACCGGA CGCGCAGCAG GCTCTGGTCC GCGCGTCGGC AGCCGGCGCC GAGACCATCG CGATCCTCGA GCCCGGCACG CCCGACGGCT ACCAGCGCAT CATCGCGGCA CGCGACGTGC TGATCGATAT GGGACTACGG GTAGCGGCAC CGTGTCCGCA CTCGGAAACG TGCCCGCTGC TTGCCACAGG CGACTGGTGC CACTTCGCCT CCCGCATCCA CCGCACCCCG CTCCACCGTC GCCTCAAGGG CGCCGACCTC CAGTACGAGG ACGAGAAGTT CGCCTACGTC GTCGCGACCC GCACCCCGGT CGGCGCATCG CCGGCGCGCA TCCTGCGGCA TCCCCAGACC CGCAAGGGAC TGGTGATGAT GCAGCTCTGC CAGCCGGACG GCACGGTCGC CCAAACGCTC GTCTCCAAGC GCCAGGGCGA CGTCTACCGC GCCGCGCGCG ACGCCGACTG GGGAGATGAG TGGCCGGTGT TGGGAAGCGC GCAGCAGCCA ACCGACTGA
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Protein sequence | MDLPTDLAAA LDAATADLPL RELESSVDRL IARYRTPGRA DRPILSGHID AAAYAAYRMP ATWGAVRAAL AATAERRPGW APQSLVDVGG GTGAAAWAAA TVFGDSLKEV TVLDQVTEAL ELGRGLARNA FSGALRHAEW RKVRFPAEVP GADLVTVSYV LSELAPDAQQ ALVRASAAGA ETIAILEPGT PDGYQRIIAA RDVLIDMGLR VAAPCPHSET CPLLATGDWC HFASRIHRTP LHRRLKGADL QYEDEKFAYV VATRTPVGAS PARILRHPQT RKGLVMMQLC QPDGTVAQTL VSKRQGDVYR AARDADWGDE WPVLGSAQQP TD
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