| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2093 |
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| Symbol | |
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| ID | 8333437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2376029 |
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| End bp | 2377759 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644955242 |
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| Product | Succinate dehydrogenase |
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| Protein accession | YP_003112853 |
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| Protein GI | 256391289 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACA CCGAGCACCA GATCGCGACA TCCGTCCTCG TCATCGGCAC CGGCGGCGCG
GGATTGCGCG CCGCCATCGA GCTGGCGGAG CGGGGCGTCG ACGTCGTGGC CGTGGGCAAG
CGGCCGAAGT CCGACGCGCA CACCAGCCTC GCCGCGGGCG GCATCAACGC CGCGCTGTCG
ACGATGGACC CCGAGGACTC CTGGCAGCAG CACGCCGCGG ACACCCTGAA AGAGAGCTAT
CTGCTGGCGG ATCCGGAGAC GGTGCGGATC GTCACGGAAA ACGCCGCCCG CGGTATCTCA
GACCTCGAAC GCTATGGCAT GCCCTTCGCG CGGGAGGCCG ACGGCCGTAT CTCCCAACGG
TTTTTCGGCG CGCACACCTA CCGGCGCACC GCCTTCGCCG GCGACTACAC GGGACTCGAG
ATCCAGCGCA CGCTGATCAA CCGCGCGACG CAGCTGGACA TCCCGATCCT GGACACCGTC
TACATCACGC GGATCCTGGT CCGGGACAAC GTCGTCTTCG GCGCGTACGG CTTCGACCTG
GAAGACGGGA CGCGGTACGT GATCCACGCC GACGCCGTCA TCCTCGCCGC CGGCGGGCAC
ACCCGGATCT GGCGCAGGAC CTCCTCGCGC CGCGACGAGA ACACCGGCGA CTCCTTCCGG
CTGGCCCTGC TGGCCGGCGG CCGGATCCGC GACGCGGAGC TCGTGCAGTT CCATCCCTCG
GGCCTGATCG CTCCGGAGAA CGCCGCCGGC ACGCTCGTCT CTGAAGCCGC GCGCGGCGAA
GGCGGAGTGC TGCGCAACGC ACTCGGCGAG CGGTTCATGA CGAAGTACGA CCCCAAGCGG
ATGGAGCTGT CCACCCGCGA CCGGGTCGCC TTGGCGGCGT ACACCGAGAT CAAGGAGGGA
CGCGGCACGC CGGCGGGCGG GGTCTGGCTC GACGTCTCCC ACCTGCCCCG GGAGACCATC
ATGCAACGGC TGCCCCGCGT CTATCAGACG CTGCTGGAGC TCCAGATGCT CGACATCACC
CGAGAGCCGA TCGAGATCGC GCCGACCGCG CACTACTCGA TGGGCGGCGT CTGGGTCCGC
CCGGAAGACC ACGGCACCGG CGTCGAAGGC CTCTACGCCC TCGGCGAAGC CGCCAGCGGT
CTGCACGGCG CGAACCGCCT CGGCGGAAAC TCCCTGATCG AGCTGCTGGT CTACGGCCGC
ATCGTCGGCG AGGCCGCCGC ACGCTACTCA CGGGATCTGC GGGCGCAACA GCGATCCGCC
GCGGCGACGG CCGAGGCGCG CGGCGAGATC GACGACCTGC TCGCCGCCGA CGGTCCGGAG
AACGTCAGGG CCCTGCAACG CACCCTGCGC AATACGATGA CCGAGCACGC AGGCGTCGTC
CGCGACGAGG ACAGCCTGCA CGAGGGACTA TCAGAGCTCG ACGACCTCGA GCAGCGGATG
AAGAACGTCG GCGTCCACCC CGACATCGCC GGCTACCAGG ACCTCGCGCA CGCCTTCGAC
CTCAAGTCCG CCGCCCTGGC CGCGCGAGCC ACCCTCGAAT CAGCCCTCGA ACGCCGCGAG
ACCCGCGGCT GCCACAACCG CTCCGACCAC CCGCACCTGG ACCCCGGGCT CCGCGTGAAC
CTCGTCTGGT CCGGCCCGGG TCAGGTCGAG CGCGAGCCGA TCGCCCCGGT CCCGGACGAG
ATCGCCGCGC TCATGCGCGA TGTGTCCAGC GAGGGAAAGC TCGTCGAGTA G
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| Protein sequence | MKDTEHQIAT SVLVIGTGGA GLRAAIELAE RGVDVVAVGK RPKSDAHTSL AAGGINAALS
TMDPEDSWQQ HAADTLKESY LLADPETVRI VTENAARGIS DLERYGMPFA READGRISQR
FFGAHTYRRT AFAGDYTGLE IQRTLINRAT QLDIPILDTV YITRILVRDN VVFGAYGFDL
EDGTRYVIHA DAVILAAGGH TRIWRRTSSR RDENTGDSFR LALLAGGRIR DAELVQFHPS
GLIAPENAAG TLVSEAARGE GGVLRNALGE RFMTKYDPKR MELSTRDRVA LAAYTEIKEG
RGTPAGGVWL DVSHLPRETI MQRLPRVYQT LLELQMLDIT REPIEIAPTA HYSMGGVWVR
PEDHGTGVEG LYALGEAASG LHGANRLGGN SLIELLVYGR IVGEAAARYS RDLRAQQRSA
AATAEARGEI DDLLAADGPE NVRALQRTLR NTMTEHAGVV RDEDSLHEGL SELDDLEQRM
KNVGVHPDIA GYQDLAHAFD LKSAALAARA TLESALERRE TRGCHNRSDH PHLDPGLRVN
LVWSGPGQVE REPIAPVPDE IAALMRDVSS EGKLVE
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