| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2014 |
|---|
| Symbol | |
|---|
| ID | 8333358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2280283 |
|---|
| End bp | 2281650 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644955164 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003112775 |
|---|
| Protein GI | 256391211 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.383085 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTCCA CGGGTCTCCG TATCGCCTGC GCCTGCGCGG CTTCCGCGCT CGCCCTGACC
GCCTGCTCGT CGTCGTCCTC AAGCGGCGGC GGCAGCGGCG GTAAAACGCT CAAGGTCGCC
TACGTCAAGT TCGGCAACGA GATCCAGGTC GACGCGCACA TGCAGAAGGT GAAGGCGCAG
TTCGAGGCCG CGCATCCGGG GGTCACGGTC AAGCTGGACC CGATCGCCGC GGCCGAGAAC
GACTACTACA CTAAGATCGA CCTGATGATG GGCTCCGGTT CGACCGCGCC CGACGTGGTC
TACGAGGACA CCTTCCTCAT CAACTCCGAC ATCAAGGCCG GCTACCTCGC CCCGCTCGAC
TCCTACCTGG CGAGCTGGAG CGACTGGTCG CAGTTCCCGG ACACGGCCAA GTCCGCCGCG
CGCGGCATCG ACGGCAAGAC CTACGGCGTC CCGATGGGCA CCGACACCCG CGCGCTGTAC
TACAACAAGG CGATGCTGAC CAAGGCCGGC GTCGCGATGC CCTGGCAGCC CAAGTCGTGG
CAGGACGTCC TCGCGGCCGC TAAAGCGGTC AAGGCCACCT CGCCCGGCGT GACGCCGCTG
AACGTCTACG CCGGCAAACC CGACGGCGAG GGCAGCACCA TGCAGGGCTT TGAGATGCTG
CTGTACGGCA CCAAGGACAC CCTGTACGAC AGCGCCAGCA AGAAGTGGAC CGCCCCGAGC
AAGGGCTTCA CCGACTCCCT GCAGTTCCTC AAGGACGCCT ACAGCGGCGG CCTGACCCTC
CCGCCGCAGA CGGAGCTGGA CCCCAACATC CCCAACGTGG TCAGCGGCCA GATGCTCCCG
CAGGGCAAGC TCGCCATCGA CCTCGACGGC TCCTGGGTGA CCGGTACTTG GGGCACCTCC
GGAGCCAAGC CCTGGCCGCA GTGGAACACC GTGATCGGCG AGGCGGCGAT GCCGACGCAG
GACGGCTCCG GCAAGGGCAC GATCAGCATG TCCGGCGGCT GGACGCTGTC GGTGACCGCG
AAGTCGAAGA ACAAGGATCT CGGGGCGCAG TTCGTCGAAC TGGCGCTGAA CAAGGAGAAC
TCCGCCTCTT ACGACATAGC GGACAGCCAG ATCGCGGTGC GCAACGACGT CGCCGCCGAT
CCCTCCTACC AGAGCACCAA CCCGACCACC GCGTTCTTCA CCGGCCTGGT CCCGGTCACG
CAGTACCGGC CGGCGTACGC CGAGTACCCG AAGATCTCCG ACGCGATCCA GGTGGCGATG
GAAGCGGTGA TCACCGGCCA GTCGTCCCCG GCGGACGCGA TGAAGGCGTA CACCGCCACG
CTGAAGGGCA TCGTCGGCTC CGACAACGTG GCGGCGGGCG CCAGCTGA
|
|---|
| Protein sequence | MLSTGLRIAC ACAASALALT ACSSSSSSGG GSGGKTLKVA YVKFGNEIQV DAHMQKVKAQ
FEAAHPGVTV KLDPIAAAEN DYYTKIDLMM GSGSTAPDVV YEDTFLINSD IKAGYLAPLD
SYLASWSDWS QFPDTAKSAA RGIDGKTYGV PMGTDTRALY YNKAMLTKAG VAMPWQPKSW
QDVLAAAKAV KATSPGVTPL NVYAGKPDGE GSTMQGFEML LYGTKDTLYD SASKKWTAPS
KGFTDSLQFL KDAYSGGLTL PPQTELDPNI PNVVSGQMLP QGKLAIDLDG SWVTGTWGTS
GAKPWPQWNT VIGEAAMPTQ DGSGKGTISM SGGWTLSVTA KSKNKDLGAQ FVELALNKEN
SASYDIADSQ IAVRNDVAAD PSYQSTNPTT AFFTGLVPVT QYRPAYAEYP KISDAIQVAM
EAVITGQSSP ADAMKAYTAT LKGIVGSDNV AAGAS
|
|---|
| |