| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1941 |
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| Symbol | |
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| ID | 8333284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2196203 |
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| End bp | 2197666 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644955090 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003112702 |
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| Protein GI | 256391138 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.948884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.342758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGATC ACGGTTTGCC AGCCGACGTC TCCCGCCGGC AGATGTTGGT CCGTTCGGCC
GCGATCGCGG CCATGGTCGG CCCGGGCTCG GCCCTGGCAG CCGGGTGCGC GGCCGGCAGC
GGGAGCAGCC CCAAGAACAA CAACGCGGGC TCCACCACCG CCGCGAACTC CTCGGACCCG
AAGAACCCGT TCGGAGTGAA GGCCTCCAGC CCGCTGGATG TCTACGTCTT CAAGGGCGGC
TACGGCGACG ACTACGCGAA GGCCTTCGAG GCGATGTACT CCTCGAAGTT CTCCGGCTCG
CAGGTCTCGC ACCACAGCGG CCAAAACCTC ACCGGCGACC TGCAGCCCCG GTTCAACGCC
GGCAGCCCGC CGGACGTCAT CGACGACTCC GGCGCCCAGC AGCTGAAGCT GGACGTGTTG
AACAGCAGCG GCCAGCTGAC CAACCTGGAC CGGCTCTTGG ACGCGCCCTC GATCGACGAC
CCGAGCAAGA AGGTCCGCGA CACCCTGCTG GCCGGCACGA TCGAGACGGG CCAGCTCGGC
CAGAGCATGT TCTCGCTGAA CTACGCGTTC ACCGTCTTCG GGCTGTGGTA CTCCACCGCG
CTGTTCCAGA AGAACAACTG GCAGGTCCCC ACCTCGTGGG AAGACTTCAT GACGCTGTGC
GCGACCATCA AGGCCAGCGG CATCGCCCCG TTCGCGCACC AGGGCAAGTA CCCGTACTAC
ATGCTGGTGC CGCTGATGGA CATGGTCGCC AAGAACGGCG GCCCGGACGT GCAGACCGCC
ATCGACAACC TGGAGCCCAA CGCCTGGAAG TCCGACGCGG TCAAGAACAG CGTCGATGCC
CTTTACGAGC TGGTGGACAA GGGCTACATG CTCCCGGGCA CCGAGGGTCT GACCCACATC
CAGTCCCAGA CCCTGTGGAA CCAGGGCAAG GCGGCGGTCA TCCCCTGCGG TTCGTGGCTG
GAGAACGAGC AGCTGTCCGC CACCCCGGCG GGCTTCAACA TGGCCGTGTT CGCCATGCCC
TCGCTCAGCG GCGACAAGAT GCCGCAGACC GCGATCCGGG CCGGCGCCGG CGAGCCGTTC
ATCGTCCCGA GCAAGGCCAA GAACCCGGCC GGCGGCCTGG AGTTCCTGCG CATCATGTGC
TCCAAGGCCG GCGGCGCCTC CTTCGCGCAG AAGGCGAACT CCCTGTCGGT GGTGAAGGAC
GCGATCACCC CGGACATCGA GGCCAAGCTG CTGCCGGGCA CCAAGTCCAG CAACGACCTC
TACCAGGCCG CCAACGGCAA GGTCATCTCC TGGTACTACC TGAACTGGTA CTCCCAGATG
GAGAAGGACC TCGAGGACGC CATGGGCCAG CTGATGGCGA ACAAGATCAA GCCGGCCGAG
TTCATCACCC GCGCGCAGGC GGCGGCCGAC AAGTGCGCCG GCGACTCCTC GGTGCAGAAG
TTCAAGCGCC CGACCACCGC CTGA
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| Protein sequence | MSDHGLPADV SRRQMLVRSA AIAAMVGPGS ALAAGCAAGS GSSPKNNNAG STTAANSSDP
KNPFGVKASS PLDVYVFKGG YGDDYAKAFE AMYSSKFSGS QVSHHSGQNL TGDLQPRFNA
GSPPDVIDDS GAQQLKLDVL NSSGQLTNLD RLLDAPSIDD PSKKVRDTLL AGTIETGQLG
QSMFSLNYAF TVFGLWYSTA LFQKNNWQVP TSWEDFMTLC ATIKASGIAP FAHQGKYPYY
MLVPLMDMVA KNGGPDVQTA IDNLEPNAWK SDAVKNSVDA LYELVDKGYM LPGTEGLTHI
QSQTLWNQGK AAVIPCGSWL ENEQLSATPA GFNMAVFAMP SLSGDKMPQT AIRAGAGEPF
IVPSKAKNPA GGLEFLRIMC SKAGGASFAQ KANSLSVVKD AITPDIEAKL LPGTKSSNDL
YQAANGKVIS WYYLNWYSQM EKDLEDAMGQ LMANKIKPAE FITRAQAAAD KCAGDSSVQK
FKRPTTA
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