Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1932 |
Symbol | |
ID | 8333275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2186042 |
End bp | 2188450 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644955081 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_003112693 |
Protein GI | 256391129 |
COG category | [R] General function prediction only |
COG ID | [COG2374] Predicted extracellular nuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAAGGA CCCGTGCCCT GACCGCCGTC GCGATTTCCG CGAGCACGAT CGCCGCGCTG CTCGCGCTGC CGTCCGCCGA GGCGACGGTG TCCACCGACG TCGTCGTGAA CGAGGTGTAC GGCGGCGGCG GCAACTCCGG CGCGACCCTG AAGAACGACT TCATCGAGCT GCGCAACAAC GGGACCGCTC CGGTCTCGCT GGCCTCCTGG TCGGTGCAGT ACATCTCCGC CGCGCCCGGC GCCACCACGA CGTGGCAGGT CACCAACCTC ACCGGGAGCA TCGCTCCGGG CAAGACCTAC CTGGTCGGTG AGGCCGCCGG CGCCGGCGGC ACCGCGGACC TGCCGGCGCC GGACGCGACC GGCGCGATCA ACATGAGCGG CACCGCCGGG ACCGTCGCGC TGGTCACCTC GCAGACCGCG CTCAGCTGCA AGACGGCCGC GGACTGCGCC GCCGACGCGA GCGTCAAGGA CCTGGTCGGC TACGGCACCG CCGTCATCCA CGAGGGCACC GCCGACGCCC CGGCCGCGAG CAACACCGCC TCGGTGGCGC GCGCCGCCGC CGGCACCGAC ACCGACCAGA ACGGCGCCGA CTTCACCGCC GGCGACCCGA CCCCGGCCGC CGGCGGCTCC GGCAGCGGCG GCGGCACCCA GCCCGGCCCG CTGCGCATCC ACGACATCCA GGGCGCCGGC TGGGTCTCGC CGGTCAACGG CCAGGCCGTG ACCAACGTCC CCGGCATCGT CACCGCGCTG CGCACCAGCG GCTCCAAGGG TTTCTGGATG CAGGACCCGA CCCCGGACGC CAACCCGGCG ACCAGCGAGG GGGTCTTCGT CTACACCAGC TCCGCCCCGA CCGTCGCGGT CGGCGACTCG GTCCTGGTCT CCGGCAAGGC GCAGGCGTAC TACCCGCTGG CCAGCGGCGA CACCGTGGCC ACCACCTCGA ACCTGTCGGT CACCGAGATC GGGACCGCGA CCGTCACCGA GGTCAGCAGC GGCAACGCGC TCCCGGCGCC GATCGTGCTC TCGGCGGCGA ACGTGCCGGC GACCTACGCC CCGGACCTGG GCGGCGCGAA CATCGAGAGC ACGCCGGTCA CGCCGTCGCG CTCGGTGCTC GACTTCTACC GCTCGATTCA GGGCATGCGG GTCGAGGTCG ACGACGCGCG CGTGGTCGGT CCCTCCGACG CCTACGGCGA GCAGTACGTG ACCGTGAAGC CGAACGAGGC CACCACCTAC CGCGGCGGTT CGGAGCTGCT CGGCGAGAAC CAGACGCCGT CCGGGCGCCT GGAGGTCGTC GCCGCCGACG GCAGCAACCC GCACGTGAGC GTCGGCGACG TCCTCACCGG CGCGACCGTC GGGGCGATGG ACTACTCGCA GTACGGCGGC TTCCTCATCT CCGCCTCGAC GGTGGGCACG GTCCAGAACA ACCACCTGGC GCCGGTCGTC GCCGACGCGA ACCCGGCCAA GGACCTGTCG GTGGCCACCT ACAACGTGGA GAACCTGGCG CCGTCGGACC CCGACAGCAA GTTCCAGCGC CTCGGCGCCG GCATCGTCAC CAACCTGGCC ACCCCCGACA TCGTCTCGGT CGAGGAGGTC CAGGACAACA GCGGCGCCAC CGACGACGGC ACGGTCGCCG CCGACCAGAC GCTGACCAAG CTCACCGCGG CCATCGCCGC CGCGGGCGGT CCGAAGTACG CCTGGCGCGA GATCGACCCG GCGAACGACA AGGACGGCGG TCAGCCCGGC GGCAACATCC GCACCGTGTT CCTGTACAAC CCGGCGCGGG TGACCTTCGT CGACACCGGC GCGGCGAGCG TGAACCGCAC GACGACCGGC ACCCAGGTCG TGAGCAAGCA CGGCGAGCCG GCGCTGAGCC TGTCGCCCGG ACGCATCGAC CCGGCGAACC CGGTCTGGAA CTCCAGCCGC AAGCCGCTGG TCGGGCAGTT CTCCTTCCGC GGCCACGACG TCTTCGTCAT CGCCAACCAC TTCGACGCCA AGCTCGGCGA CCAGAACCAG GACGGCCGCT TCCAGTACCC GGCGCAGTCC TCGGCGCTGC AGCGCTCCGG CCAGGCGCAG GTCGAGCACG ACTTCGTGCA GAAGCTGCTG GACGTGGACA AGAAGGCCGA CGTGGTGGTC GTGGGCGACC TCAACGACTA CCAGTTCAGC CCGGCGCTGA GCTCGCTGCG CACCGGCACC TCCGACGGCA CCGGCCCGTC GATCCTGACC GACCTGATCA GCACCCTGCC GACGAACGAG CAGTACACGT ACGACTACGA GGGTGTCTCC GAGGTGCTCG ACCACATCCT GGTCAGCAAG GGCATCAAGG ACCTGAGCTA CCAGGTGGTG CACGTCAACG CCGAGTACAC CGACCAGGCC AGCGACCACG ACCCGCAGGT GGTGCGGATC AAGCCGTAA
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Protein sequence | MQRTRALTAV AISASTIAAL LALPSAEATV STDVVVNEVY GGGGNSGATL KNDFIELRNN GTAPVSLASW SVQYISAAPG ATTTWQVTNL TGSIAPGKTY LVGEAAGAGG TADLPAPDAT GAINMSGTAG TVALVTSQTA LSCKTAADCA ADASVKDLVG YGTAVIHEGT ADAPAASNTA SVARAAAGTD TDQNGADFTA GDPTPAAGGS GSGGGTQPGP LRIHDIQGAG WVSPVNGQAV TNVPGIVTAL RTSGSKGFWM QDPTPDANPA TSEGVFVYTS SAPTVAVGDS VLVSGKAQAY YPLASGDTVA TTSNLSVTEI GTATVTEVSS GNALPAPIVL SAANVPATYA PDLGGANIES TPVTPSRSVL DFYRSIQGMR VEVDDARVVG PSDAYGEQYV TVKPNEATTY RGGSELLGEN QTPSGRLEVV AADGSNPHVS VGDVLTGATV GAMDYSQYGG FLISASTVGT VQNNHLAPVV ADANPAKDLS VATYNVENLA PSDPDSKFQR LGAGIVTNLA TPDIVSVEEV QDNSGATDDG TVAADQTLTK LTAAIAAAGG PKYAWREIDP ANDKDGGQPG GNIRTVFLYN PARVTFVDTG AASVNRTTTG TQVVSKHGEP ALSLSPGRID PANPVWNSSR KPLVGQFSFR GHDVFVIANH FDAKLGDQNQ DGRFQYPAQS SALQRSGQAQ VEHDFVQKLL DVDKKADVVV VGDLNDYQFS PALSSLRTGT SDGTGPSILT DLISTLPTNE QYTYDYEGVS EVLDHILVSK GIKDLSYQVV HVNAEYTDQA SDHDPQVVRI KP
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