| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1912 |
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| Symbol | |
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| ID | 8333255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2167678 |
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| End bp | 2169672 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644955061 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_003112673 |
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| Protein GI | 256391109 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGACT CCACTCCTCC TCCCCCGCCG CGCCGTCCTC GGCCGCAGCC TCCGTACGAC
CTGTCGCCGC GCGGTCAGGG TCCTCGTCAC CAGGACGATC TGCACTACTG GACGCCGCGT
CCGCAGCAGC CGGAGCGTCC TGCTCCGCCT CGGCGTCCCG CTCCCGAGCC GCCCCGGCGG
CGTCGGCGCC GCGCGACGAT CGTCGCCCGC GCCCTGGCCT GCACGACGTC GGCGGCGATC
GTCCTGGCCA GCGCCGCGAT CTGGGCCGAG TATCACAACC TGACCTCGGG TCTGCTCACC
TCCAACGCGA TCAACGAGAT CCGCTCGGGC GAAAAGGGCT ACGTCGCCCC GCACCTGGAC
GGCTCAGTCA ACCTGCTGCT GATCGGGCTG GACTCGCGCA AGGACATGAA CGGCAACGAT
CTGCCGACCG ACTTCGTGGA GCAGGAGCTG CACGCCGGTT CCTCGGAGAT CGGCGGCTAC
AACGCCAATG TCCTGATCTT CCTGCACATC CCGGCCGACG GCGGGCGCGT GACCGCGTTC
TCCATCGCCC GCGACGACTA CGTCGAGGAG CCCGGCGGGT CTTCGGCCGT CGGTGACATC
CCGGACCTGG GGATGCACAA GATCAAGGAG GCGTACGGCC GGGCCAAGGC GATCGCGGTG
GACCGGCTGA AGGCCTCCGG CATGACCGAC CAGGCGCAGA TCGAGAAGGT CAGCCGCGAG
GTCGGGCGGG AGTCCACGAT CCGGGCCGTG CAGCTGCTCA CCGGCGAGCA CGTGGACCAC
CTGGCAGAGA TCAACCTGCT GGGTTTCTAC GACGTCGCCC AGGCGGTCGG TCCGATCGAG
GTCTGCCTGA ACCATCCGGT GAACGACCCG ATCGAGGACG GCGCGGGCAC CGGGCTGAAG
CTGCCGGCCG GGCACTCGAT GCTGGACGCC GCGACCGCGT TGCAGTTCGT GCGTCAGCGT
TTCCATCTGC TGCGCGGGGA CTTCGACCGG AACCGGCGGC AGCAGGCGTT CCTGGCGGCG
GTGATGCACA AGCTCAAGAG CGAGGGCGTG ATCGGCGACC TGGGCAAGAT GCAGGCGCTG
TTCGACGTGG TGAAGAAGGA CGTGGTCATC GACGATTCCT GGGACGTCCT GGACTTCGCC
GACCGCGCGC AGAACCTGAC CGGCGGGAAC GCGGACTTCC GGGAACTGCC GATCACCGGG
CAGCCGGTGC TGCCGGCGGA CGGTTCGGTG AACACGGTGA ATCCGTTGCA GATCCGGCAG
ATCGTGATGA CCGGGTTCGG GGACGCCAAG GAGTTCGCGA CCGAGATGGC TCAGGCCACT
GAGAACGGCG GGGATCCGGC GTCGTCGCTG GGACCGCGGT CGCTGACCGA TCCGGGTGCG
GGACTGGCGC AGGGCGGTTC GGTACTGCCG GGGCAGAATG CCTCGGTGCA GGCCGGTGCG
GCGCAGGGCG ACGGCGCGCC CGGCGCGTTG CCGCCGCTGC CGGCTGCGCG CGGCGGGGAA
AGCGGCGCGG GCCTGGGCAT GCGCCCGGCG GCGATCGCGC CGTCGGACAC GCACACCGTC
GTCGACCTTT ACAACGCCAC CGCCAGGAAC GGCCTGGCCA CGACGGTCGG GGACTGGCTG
GCGGCGTCCG GCTGGCCGGT GGACAAGACC GCCGGGGCGG CGGCGCAGAG CCGGACCACG
ATCCTGTACG GCAAGGGCGC GGCGAAGGCG GCCGGGCAGC TCGCGGCGGC GCTCGGCGTG
CAGGCGCTGC CGGCGCCGTC GGCGCGTACC GCGGCCGGAC ACGTGCTGAT CAGACTCGGT
GCCGACTACA CTCCGCCCGG TGGACCCCAG CCTCTGGCGC CGACCGACGC GACCGGCCCG
GGCCCGGCGG ATCCCGCGGA TCCCGCGAAC CCTGCGAACC CCGCGAACCC CGCGACCGCG
GATCCGTCCG GCAGCCCGGA CCCGGCGGAC TCCCCCGGCA TCGCCATGGA CAGCGGGATC
ACCTGCGTGA ACTGA
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| Protein sequence | MPDSTPPPPP RRPRPQPPYD LSPRGQGPRH QDDLHYWTPR PQQPERPAPP RRPAPEPPRR
RRRRATIVAR ALACTTSAAI VLASAAIWAE YHNLTSGLLT SNAINEIRSG EKGYVAPHLD
GSVNLLLIGL DSRKDMNGND LPTDFVEQEL HAGSSEIGGY NANVLIFLHI PADGGRVTAF
SIARDDYVEE PGGSSAVGDI PDLGMHKIKE AYGRAKAIAV DRLKASGMTD QAQIEKVSRE
VGRESTIRAV QLLTGEHVDH LAEINLLGFY DVAQAVGPIE VCLNHPVNDP IEDGAGTGLK
LPAGHSMLDA ATALQFVRQR FHLLRGDFDR NRRQQAFLAA VMHKLKSEGV IGDLGKMQAL
FDVVKKDVVI DDSWDVLDFA DRAQNLTGGN ADFRELPITG QPVLPADGSV NTVNPLQIRQ
IVMTGFGDAK EFATEMAQAT ENGGDPASSL GPRSLTDPGA GLAQGGSVLP GQNASVQAGA
AQGDGAPGAL PPLPAARGGE SGAGLGMRPA AIAPSDTHTV VDLYNATARN GLATTVGDWL
AASGWPVDKT AGAAAQSRTT ILYGKGAAKA AGQLAAALGV QALPAPSART AAGHVLIRLG
ADYTPPGGPQ PLAPTDATGP GPADPADPAN PANPANPATA DPSGSPDPAD SPGIAMDSGI
TCVN
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