Gene Caci_1849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1849 
Symbol 
ID8333192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2094059 
End bp2094751 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content72% 
IMG OID644954998 
Producthypothetical protein 
Protein accessionYP_003112610 
Protein GI256391046 
COG category 
COG ID 
TIGRFAM ID[TIGR01451] conserved repeat domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.517227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACCA TGATGCGCAG CGCTGCGGCA GTCGGCGTGG TCGTCGCGGC GGCGATGACC 
GTCGGGACCA TGTCCACGCT CGCGGCCCGG GCCGGCTCCG GCGCCCTGCC CACGCTTCCC
ACCGACGCCA GCGCGAGCAG CACCGGCAAC GGCGTGCGCG TGGAGATCAG CGACGACACC
CGTTCGGCCC ATTCCGGCGA CGTCGTGGAT TACACGGTCC GGGTGGACAA CGACTCGCCG
ACCTCGTACC CGGCCCTCGA GGTCTACCAC CTAGTCCCCG CGGGCTTCCA GCTCGTGGAC
TCCAGCCCCA ACGCTACGCA GCAGGACCGC ACGATGCGCT GGACCGCCAA CGTCCCCTCC
GGCCACACAG TGGTCTTCTC CGACCAGGTC ATGGCCGGCA CCGTCGAGGA ATCCGACCAC
CTGACACCCC ACGTCCGCGA CGCCAAGACC GGCACCCGGA CCGACCAGTT CACGTCCACG
GCCTGCGCCC GCAGCTCGTC CACCGGCCCG GCCCTGGCCT GCGGCACGGT CCGCGAGCAG
CTGACCGACG GACCCGACGC CATCGCCGGC GTCGCGGGCC CGAACGGCAA GCACTGGCAG
CCCGGCCTGC TGGGCATCGC GCTGCTGGTG GCGCTGTACG CGGGCTTCCG GAGCTTCTTC
CGCAAGCGAG GGGAGCAGGG CGAAGAGGCC TGA
 
Protein sequence
MRTMMRSAAA VGVVVAAAMT VGTMSTLAAR AGSGALPTLP TDASASSTGN GVRVEISDDT 
RSAHSGDVVD YTVRVDNDSP TSYPALEVYH LVPAGFQLVD SSPNATQQDR TMRWTANVPS
GHTVVFSDQV MAGTVEESDH LTPHVRDAKT GTRTDQFTST ACARSSSTGP ALACGTVREQ
LTDGPDAIAG VAGPNGKHWQ PGLLGIALLV ALYAGFRSFF RKRGEQGEEA