Gene Caci_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1827 
Symbol 
ID8333170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2071965 
End bp2073266 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content74% 
IMG OID644954977 
Productamine oxidase 
Protein accessionYP_003112589 
Protein GI256391025 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGCAC AAAGTCCGAG CCACCGGCAT CACCTGGACG CCGACGTGAT CGTCGTCGGT 
GCCGGGGTCG CCGGATTGCA CGCCGCGGGA CGGCTGCACG AGGCGGGTTT GGACGTCCTG
GTCGTCGAGG CGTCGGACCG GGTGGGGGGC AGGGCCGGCA CCGAGAGGGT CTCGGGGTTC
GTCGTGGACA AGGGATTCCA CTTGATGAAC TCCGGCGAGA ACGGGGAGAA CGCGAAGCTG
GAGCTGGGGT GCTTCGCCCC CGGCGTGGAC CTGCAGCTGG ACGGCAAGCG CATCCGCTAC
GGCGACCGCG CGGGCAGCGA CGGAGCCCTG GGAGCGGGCA ACGTCCTGCG CACCCCGCTC
GGCTCCCCCG CCGAGCGCCG CCGCCAGACC GGCTGGCTGC TGCGGGTCGC GCTGAACCGT
CCCGAGAGCA TTCTGGACTG CCCGGAGCGC ACGGCCGCGG AGCTGGTGGC CGAGGTGGGG
CTCTCACGCC GGGTGATAGA CGGCTTCCTG CGGCCGTATC TGGAGGCCTT CGCCGCCGAG
CCGGACCCGG ACCTGTCGGT GTCGGGCCGG GCGATGGAGC TCGCGCTGCG CCAGCTGGTC
CGGGGGCGGT GGTGCCTGCC GGCCAGCGGG ATCGCCGCCA TCCCGCAGCG GCTGGCCGAG
CGGCTGCCGA CCGGGGCGGT GCGGCTGGAG ACCGAGGTCC TGATGGTCTA CGCGAACGGC
GTGGTCACCG CCGACGAGGT GCTGCGCAGC TCGGCGGTGG TGGTGGCGAC CGACGCGGCG
ACGGCGGTGG AGCTGCTGCC GGGACTGCAC GAGCCGGAGT CGCGGTCGGT GACCGCGTTC
CACCACGCGA CCGTGCTGCC GCCGCCGCGC GCCGAACCCG CGGTCCTGAT CGACGCCGAC
CCGCACTCCC CGGTCGCGCG CACGGCGGCG GTCAGCCACG CGGTGCCCGC CCGGAGCCCC
GACGGCCGGA CGCTGGTGTC CACGAACGTG GTCGGGCACA CCGGGACCCG CACGTCCGAA
CTTGAGGCGG CGGTCCGCGC CCGGCTGGCG GAGCTGTACC CGGGCGGCGA CGACCGCTGG
GAGTGCGTGG CGGTGCACCA CTTCCCGCAC GCGGTACCGG CGATGACCTC GCCGCACAAC
TTCCGGCGGC CGGTACGGCT GCTGCACGGG TTGTACGTGT GCGGAGACCA CCGCGGCACG
GCCGGGATCG ACGGGGCGAT GGAGTCGGGA CAGCGTGCCG CGCGGTCCGT GTTGGCCGAT
CTCGGGGTGT CGTTTCGCAC CGGAGAACTG GTCACCGCCT GA
 
Protein sequence
MTAQSPSHRH HLDADVIVVG AGVAGLHAAG RLHEAGLDVL VVEASDRVGG RAGTERVSGF 
VVDKGFHLMN SGENGENAKL ELGCFAPGVD LQLDGKRIRY GDRAGSDGAL GAGNVLRTPL
GSPAERRRQT GWLLRVALNR PESILDCPER TAAELVAEVG LSRRVIDGFL RPYLEAFAAE
PDPDLSVSGR AMELALRQLV RGRWCLPASG IAAIPQRLAE RLPTGAVRLE TEVLMVYANG
VVTADEVLRS SAVVVATDAA TAVELLPGLH EPESRSVTAF HHATVLPPPR AEPAVLIDAD
PHSPVARTAA VSHAVPARSP DGRTLVSTNV VGHTGTRTSE LEAAVRARLA ELYPGGDDRW
ECVAVHHFPH AVPAMTSPHN FRRPVRLLHG LYVCGDHRGT AGIDGAMESG QRAARSVLAD
LGVSFRTGEL VTA