Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1827 |
Symbol | |
ID | 8333170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2071965 |
End bp | 2073266 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644954977 |
Product | amine oxidase |
Protein accession | YP_003112589 |
Protein GI | 256391025 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGCAC AAAGTCCGAG CCACCGGCAT CACCTGGACG CCGACGTGAT CGTCGTCGGT GCCGGGGTCG CCGGATTGCA CGCCGCGGGA CGGCTGCACG AGGCGGGTTT GGACGTCCTG GTCGTCGAGG CGTCGGACCG GGTGGGGGGC AGGGCCGGCA CCGAGAGGGT CTCGGGGTTC GTCGTGGACA AGGGATTCCA CTTGATGAAC TCCGGCGAGA ACGGGGAGAA CGCGAAGCTG GAGCTGGGGT GCTTCGCCCC CGGCGTGGAC CTGCAGCTGG ACGGCAAGCG CATCCGCTAC GGCGACCGCG CGGGCAGCGA CGGAGCCCTG GGAGCGGGCA ACGTCCTGCG CACCCCGCTC GGCTCCCCCG CCGAGCGCCG CCGCCAGACC GGCTGGCTGC TGCGGGTCGC GCTGAACCGT CCCGAGAGCA TTCTGGACTG CCCGGAGCGC ACGGCCGCGG AGCTGGTGGC CGAGGTGGGG CTCTCACGCC GGGTGATAGA CGGCTTCCTG CGGCCGTATC TGGAGGCCTT CGCCGCCGAG CCGGACCCGG ACCTGTCGGT GTCGGGCCGG GCGATGGAGC TCGCGCTGCG CCAGCTGGTC CGGGGGCGGT GGTGCCTGCC GGCCAGCGGG ATCGCCGCCA TCCCGCAGCG GCTGGCCGAG CGGCTGCCGA CCGGGGCGGT GCGGCTGGAG ACCGAGGTCC TGATGGTCTA CGCGAACGGC GTGGTCACCG CCGACGAGGT GCTGCGCAGC TCGGCGGTGG TGGTGGCGAC CGACGCGGCG ACGGCGGTGG AGCTGCTGCC GGGACTGCAC GAGCCGGAGT CGCGGTCGGT GACCGCGTTC CACCACGCGA CCGTGCTGCC GCCGCCGCGC GCCGAACCCG CGGTCCTGAT CGACGCCGAC CCGCACTCCC CGGTCGCGCG CACGGCGGCG GTCAGCCACG CGGTGCCCGC CCGGAGCCCC GACGGCCGGA CGCTGGTGTC CACGAACGTG GTCGGGCACA CCGGGACCCG CACGTCCGAA CTTGAGGCGG CGGTCCGCGC CCGGCTGGCG GAGCTGTACC CGGGCGGCGA CGACCGCTGG GAGTGCGTGG CGGTGCACCA CTTCCCGCAC GCGGTACCGG CGATGACCTC GCCGCACAAC TTCCGGCGGC CGGTACGGCT GCTGCACGGG TTGTACGTGT GCGGAGACCA CCGCGGCACG GCCGGGATCG ACGGGGCGAT GGAGTCGGGA CAGCGTGCCG CGCGGTCCGT GTTGGCCGAT CTCGGGGTGT CGTTTCGCAC CGGAGAACTG GTCACCGCCT GA
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Protein sequence | MTAQSPSHRH HLDADVIVVG AGVAGLHAAG RLHEAGLDVL VVEASDRVGG RAGTERVSGF VVDKGFHLMN SGENGENAKL ELGCFAPGVD LQLDGKRIRY GDRAGSDGAL GAGNVLRTPL GSPAERRRQT GWLLRVALNR PESILDCPER TAAELVAEVG LSRRVIDGFL RPYLEAFAAE PDPDLSVSGR AMELALRQLV RGRWCLPASG IAAIPQRLAE RLPTGAVRLE TEVLMVYANG VVTADEVLRS SAVVVATDAA TAVELLPGLH EPESRSVTAF HHATVLPPPR AEPAVLIDAD PHSPVARTAA VSHAVPARSP DGRTLVSTNV VGHTGTRTSE LEAAVRARLA ELYPGGDDRW ECVAVHHFPH AVPAMTSPHN FRRPVRLLHG LYVCGDHRGT AGIDGAMESG QRAARSVLAD LGVSFRTGEL VTA
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