Gene Caci_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1821 
Symbol 
ID8333164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2066982 
End bp2067440 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content70% 
IMG OID644954971 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003112583 
Protein GI256391019 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGACG AACCGCGGTG GCTGTCCGAT CAGGAGATGA CGGCCTGGAC GGGCTTCCTG 
GCCGCGAGTG CTCTGGTGGA GCGGCGGATC GACCACCAGT TGCGTGAGGA CGCGGGGTTG
TCGCATACCC AGTACGAGAT TCTGGTGCGG CTCTCCGCGG CGCCTGACGG GTCGCTGCGG
ATGACCGAGC TCGCCGAAGC GCTGCTGAAC TCCAAGAGCG GGCTGACGTA CCAGATGACG
CAGCTGGAGA AGGCGGGGCT GACCGAGCGG CGGTCGTGCC CGACCGACGT GCGCGGGGTG
TTCGCGGTGC TGACCGACGC CGGGCGCGCG AAGTTGGAGC AGGCGGCACC CGGACACGTT
GCGGTGGTGC GGGAGGCGCT CATCGACGTG CTGACCCCCG AGCAGCTCGC GGTGCTGGCC
GACGGGCTCG GCGAGGTCGC GCGGCGGCTG CGGGAATAG
 
Protein sequence
MGDEPRWLSD QEMTAWTGFL AASALVERRI DHQLREDAGL SHTQYEILVR LSAAPDGSLR 
MTELAEALLN SKSGLTYQMT QLEKAGLTER RSCPTDVRGV FAVLTDAGRA KLEQAAPGHV
AVVREALIDV LTPEQLAVLA DGLGEVARRL RE